Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 MIR5189-201ENST00000577370 114 ntBASIC16.72■□□□□ 0.27
VARS2Q5ST30 BTNL10-201ENST00000595971 695 ntBASIC16.72■□□□□ 0.27
VARS2Q5ST30 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 AC069224.1-201ENST00000566372 1715 ntBASIC16.72■□□□□ 0.27
VARS2Q5ST30 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.71■□□□□ 0.27
VARS2Q5ST30 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.71■□□□□ 0.27
VARS2Q5ST30 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
VARS2Q5ST30 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 SOCS2P1-201ENST00000417727 557 ntBASIC16.71■□□□□ 0.27
VARS2Q5ST30 AC234783.1-201ENST00000441761 496 ntBASIC16.71■□□□□ 0.27
VARS2Q5ST30 CROCCP4-201ENST00000457096 498 ntBASIC16.71■□□□□ 0.27
VARS2Q5ST30 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.71■□□□□ 0.27
VARS2Q5ST30 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.71■□□□□ 0.27
VARS2Q5ST30 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.71■□□□□ 0.27
VARS2Q5ST30 AC120045.2-201ENST00000567334 178 ntBASIC16.71■□□□□ 0.27
VARS2Q5ST30 AC090079.2-201ENST00000575289 768 ntBASIC16.71■□□□□ 0.27
VARS2Q5ST30 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC16.71■□□□□ 0.27
VARS2Q5ST30 MIR4525-201ENST00000580000 75 ntBASIC16.71■□□□□ 0.27
VARS2Q5ST30 MIR4313-201ENST00000580760 101 ntBASIC16.71■□□□□ 0.27
VARS2Q5ST30 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.71■□□□□ 0.27
VARS2Q5ST30 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.71■□□□□ 0.27
VARS2Q5ST30 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.71■□□□□ 0.27
VARS2Q5ST30 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.71■□□□□ 0.27
VARS2Q5ST30 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.71■□□□□ 0.27
VARS2Q5ST30 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARS2Q5ST30 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.71■□□□□ 0.26
VARS2Q5ST30 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
VARS2Q5ST30 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
VARS2Q5ST30 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
VARS2Q5ST30 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
VARS2Q5ST30 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
VARS2Q5ST30 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 AL133338.1-201ENST00000565695 1517 ntBASIC16.7■□□□□ 0.26
VARS2Q5ST30 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 AC011270.2-201ENST00000624293 2550 ntBASIC16.7■□□□□ 0.26
VARS2Q5ST30 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 AC018665.1-201ENST00000622927 1362 ntBASIC16.7■□□□□ 0.26
VARS2Q5ST30 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 C1QBPP1-201ENST00000400117 770 ntBASIC16.7■□□□□ 0.26
VARS2Q5ST30 ACTG1P3-201ENST00000431775 1114 ntBASIC16.7■□□□□ 0.26
VARS2Q5ST30 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 SLC25A47P1-201ENST00000531577 414 ntBASIC16.7■□□□□ 0.26
VARS2Q5ST30 TDH-203ENST00000531764 1110 ntBASIC16.7■□□□□ 0.26
VARS2Q5ST30 ENPP7P5-201ENST00000541031 1031 ntBASIC16.7■□□□□ 0.26
VARS2Q5ST30 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms