Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 AC022532.1-201ENST00000624563 1728 ntBASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 TMBIM7P-203ENST00000641617 1718 ntBASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 AC009477.1-201ENST00000452936 217 ntBASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 ZNF890P-202ENST00000530367 1156 ntBASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 AC005498.2-205ENST00000593218 784 ntBASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
PTPN20Q4JDL3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 RPL13P2-201ENST00000440687 659 ntBASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 SLED1-202ENST00000512051 380 ntBASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AC074044.1-201ENST00000609673 707 ntBASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AF228730.6-201ENST00000641497 218 ntBASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AC084121.3-201ENST00000641716 218 ntBASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN20Q4JDL3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms