Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H1AQ02539 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.22□□□□□ -0.45
HIST1H1AQ02539 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HIST1H1AQ02539 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.22□□□□□ -0.45
HIST1H1AQ02539 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H1AQ02539 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 RNA5SP419-201ENST00000515908 135 ntBASIC12.21□□□□□ -0.45
HIST1H1AQ02539 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 AC018845.2-201ENST00000568326 409 ntBASIC12.21□□□□□ -0.45
HIST1H1AQ02539 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 AC064836.3-201ENST00000607928 673 ntBASIC12.21□□□□□ -0.45
HIST1H1AQ02539 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.21□□□□□ -0.45
HIST1H1AQ02539 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1AQ02539 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
HIST1H1AQ02539 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 AC025580.3-201ENST00000617932 1424 ntBASIC12.2□□□□□ -0.46
HIST1H1AQ02539 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 AC139749.1-202ENST00000617529 3139 ntBASIC12.2□□□□□ -0.46
HIST1H1AQ02539 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 AC016027.1-202ENST00000607927 1699 ntBASIC12.2□□□□□ -0.46
HIST1H1AQ02539 HLA-A-201ENST00000376802 1334 ntBASIC12.2□□□□□ -0.46
HIST1H1AQ02539 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 AC092919.2-201ENST00000623631 1645 ntBASIC12.2□□□□□ -0.46
HIST1H1AQ02539 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 AC007967.2-201ENST00000432613 625 ntBASIC12.2□□□□□ -0.46
HIST1H1AQ02539 RHOQP3-201ENST00000437982 621 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms