Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IRX3P78415 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
IRX3P78415 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
IRX3P78415 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
IRX3P78415 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.46■□□□□ 0.55
IRX3P78415 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.46■□□□□ 0.55
IRX3P78415 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.46■□□□□ 0.55
IRX3P78415 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.46■□□□□ 0.55
IRX3P78415 TDH-203ENST00000531764 1110 ntBASIC18.46■□□□□ 0.55
IRX3P78415 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.46■□□□□ 0.55
IRX3P78415 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.46■□□□□ 0.55
IRX3P78415 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.46■□□□□ 0.55
IRX3P78415 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.46■□□□□ 0.55
IRX3P78415 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IRX3P78415 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IRX3P78415 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC18.46■□□□□ 0.55
IRX3P78415 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IRX3P78415 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.46■□□□□ 0.55
IRX3P78415 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IRX3P78415 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
IRX3P78415 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
IRX3P78415 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
IRX3P78415 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.45■□□□□ 0.54
IRX3P78415 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 PDIA3P1-201ENST00000471856 1510 ntBASIC18.45■□□□□ 0.54
IRX3P78415 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.45■□□□□ 0.54
IRX3P78415 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 FAM86MP-201ENST00000340703 885 ntBASIC18.45■□□□□ 0.54
IRX3P78415 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.45■□□□□ 0.54
IRX3P78415 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.45■□□□□ 0.54
IRX3P78415 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 CTBP2P5-201ENST00000454986 1264 ntBASIC18.45■□□□□ 0.54
IRX3P78415 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.45■□□□□ 0.54
IRX3P78415 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 FAM86LP-201ENST00000478302 853 ntBASIC18.45■□□□□ 0.54
IRX3P78415 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.45■□□□□ 0.54
IRX3P78415 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.45■□□□□ 0.54
IRX3P78415 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.45■□□□□ 0.54
IRX3P78415 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.45■□□□□ 0.54
IRX3P78415 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 MIR5189-201ENST00000577370 114 ntBASIC18.45■□□□□ 0.54
IRX3P78415 MIR4525-201ENST00000580000 75 ntBASIC18.45■□□□□ 0.54
IRX3P78415 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.45■□□□□ 0.54
IRX3P78415 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.45■□□□□ 0.54
IRX3P78415 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
IRX3P78415 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.45■□□□□ 0.54
IRX3P78415 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.45■□□□□ 0.54
IRX3P78415 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IRX3P78415 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IRX3P78415 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IRX3P78415 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IRX3P78415 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.44■□□□□ 0.54
IRX3P78415 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IRX3P78415 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
IRX3P78415 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IRX3P78415 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IRX3P78415 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.44■□□□□ 0.54
IRX3P78415 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.44■□□□□ 0.54
IRX3P78415 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IRX3P78415 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.44■□□□□ 0.54
IRX3P78415 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IRX3P78415 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.44■□□□□ 0.54
IRX3P78415 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.44■□□□□ 0.54
IRX3P78415 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
IRX3P78415 KLF2P4-201ENST00000451959 1225 ntBASIC18.44■□□□□ 0.54
IRX3P78415 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
IRX3P78415 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.44■□□□□ 0.54
IRX3P78415 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.44■□□□□ 0.54
IRX3P78415 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.44■□□□□ 0.54
IRX3P78415 AL022328.1-201ENST00000610050 478 ntBASIC18.44■□□□□ 0.54
IRX3P78415 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.44■□□□□ 0.54
IRX3P78415 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
IRX3P78415 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
IRX3P78415 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms