Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PHC1P78364 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.15■□□□□ 0.02
PHC1P78364 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PHC1P78364 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.15■□□□□ 0.02
PHC1P78364 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 TFAMP1-201ENST00000412727 736 ntBASIC15.15■□□□□ 0.02
PHC1P78364 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.15■□□□□ 0.02
PHC1P78364 AL355306.1-201ENST00000415580 579 ntBASIC15.15■□□□□ 0.02
PHC1P78364 AL671277.1-201ENST00000429656 993 ntBASIC15.15■□□□□ 0.02
PHC1P78364 ADH5P3-201ENST00000433842 1137 ntBASIC15.15■□□□□ 0.02
PHC1P78364 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 KRT18P3-201ENST00000451602 1288 ntBASIC15.15■□□□□ 0.02
PHC1P78364 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.15■□□□□ 0.02
PHC1P78364 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.15■□□□□ 0.02
PHC1P78364 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PHC1P78364 AC243562.2-201ENST00000561247 970 ntBASIC15.15■□□□□ 0.02
PHC1P78364 AL135744.1-201ENST00000565098 629 ntBASIC15.15■□□□□ 0.02
PHC1P78364 AC106730.1-201ENST00000566722 1090 ntBASIC15.15■□□□□ 0.02
PHC1P78364 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.15■□□□□ 0.02
PHC1P78364 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.15■□□□□ 0.02
PHC1P78364 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.15■□□□□ 0.02
PHC1P78364 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 AC008267.7-201ENST00000624570 1194 ntBASIC15.15■□□□□ 0.02
PHC1P78364 AC092902.6-201ENST00000641783 218 ntBASIC15.15■□□□□ 0.02
PHC1P78364 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
PHC1P78364 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PHC1P78364 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.15■□□□□ 0.02
PHC1P78364 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.15■□□□□ 0.02
PHC1P78364 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PHC1P78364 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
PHC1P78364 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PHC1P78364 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PHC1P78364 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.14■□□□□ 0.01
PHC1P78364 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.14■□□□□ 0.01
PHC1P78364 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.14■□□□□ 0.01
PHC1P78364 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 RPS8P6-201ENST00000426177 609 ntBASIC15.14■□□□□ 0.01
PHC1P78364 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.14■□□□□ 0.01
PHC1P78364 AP000347.1-202ENST00000435868 847 ntBASIC15.14■□□□□ 0.01
PHC1P78364 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.14■□□□□ 0.01
PHC1P78364 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.14■□□□□ 0.01
PHC1P78364 AC243562.1-201ENST00000560672 389 ntBASIC15.14■□□□□ 0.01
PHC1P78364 LINC01225-203ENST00000563550 1244 ntBASIC15.14■□□□□ 0.01
PHC1P78364 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.14■□□□□ 0.01
PHC1P78364 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 AC024267.1-201ENST00000582320 895 ntBASIC15.14■□□□□ 0.01
PHC1P78364 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.14■□□□□ 0.01
PHC1P78364 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.14■□□□□ 0.01
PHC1P78364 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.14■□□□□ 0.01
PHC1P78364 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.14■□□□□ 0.01
PHC1P78364 AC091812.2-201ENST00000619081 385 ntBASIC15.14■□□□□ 0.01
PHC1P78364 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.14■□□□□ 0.01
PHC1P78364 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.14■□□□□ 0.01
PHC1P78364 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.14■□□□□ 0.01
PHC1P78364 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.14■□□□□ 0.01
PHC1P78364 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PHC1P78364 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.14■□□□□ 0.01
PHC1P78364 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.13■□□□□ 0.01
PHC1P78364 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.13■□□□□ 0.01
PHC1P78364 ZNF259P1-201ENST00000407656 1365 ntBASIC15.13■□□□□ 0.01
PHC1P78364 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PHC1P78364 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHC1P78364 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHC1P78364 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.13■□□□□ 0.01
PHC1P78364 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.13■□□□□ 0.01
PHC1P78364 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.13■□□□□ 0.01
PHC1P78364 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHC1P78364 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PHC1P78364 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHC1P78364 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHC1P78364 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
PHC1P78364 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms