Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 PHKG1P2-201ENST00000457537 863 ntBASIC14.31□□□□□ -0.12
RPS4XP62701 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.31□□□□□ -0.12
RPS4XP62701 IGHV3-42-201ENST00000520410 361 ntBASIC14.31□□□□□ -0.12
RPS4XP62701 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.31□□□□□ -0.12
RPS4XP62701 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.31□□□□□ -0.12
RPS4XP62701 HNRNPUP1-201ENST00000554987 333 ntBASIC14.31□□□□□ -0.12
RPS4XP62701 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.31□□□□□ -0.12
RPS4XP62701 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.31□□□□□ -0.12
RPS4XP62701 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.31□□□□□ -0.12
RPS4XP62701 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.31□□□□□ -0.12
RPS4XP62701 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.31□□□□□ -0.12
RPS4XP62701 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.31□□□□□ -0.12
RPS4XP62701 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.31□□□□□ -0.12
RPS4XP62701 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.31□□□□□ -0.12
RPS4XP62701 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RPS4XP62701 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
RPS4XP62701 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
RPS4XP62701 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RPS4XP62701 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.31□□□□□ -0.12
RPS4XP62701 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.31□□□□□ -0.12
RPS4XP62701 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.31□□□□□ -0.12
RPS4XP62701 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
RPS4XP62701 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS4XP62701 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS4XP62701 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS4XP62701 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
RPS4XP62701 C18orf15-201ENST00000623680 2534 ntBASIC14.3□□□□□ -0.12
RPS4XP62701 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RPS4XP62701 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RPS4XP62701 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.3□□□□□ -0.12
RPS4XP62701 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.3□□□□□ -0.12
RPS4XP62701 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS4XP62701 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS4XP62701 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.3□□□□□ -0.12
RPS4XP62701 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.3□□□□□ -0.12
RPS4XP62701 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.3□□□□□ -0.12
RPS4XP62701 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 AC190387.1-201ENST00000551683 408 ntBASIC14.3□□□□□ -0.12
RPS4XP62701 AC026150.2-201ENST00000564693 1156 ntBASIC14.3□□□□□ -0.12
RPS4XP62701 AC140878.1-201ENST00000565277 250 ntBASIC14.3□□□□□ -0.12
RPS4XP62701 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS4XP62701 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.3□□□□□ -0.12
RPS4XP62701 AC097359.3-201ENST00000603982 1210 ntBASIC14.3□□□□□ -0.12
RPS4XP62701 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 MIR6080-201ENST00000617359 66 ntBASIC14.3□□□□□ -0.12
RPS4XP62701 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RPS4XP62701 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS4XP62701 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RPS4XP62701 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RPS4XP62701 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS4XP62701 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RPS4XP62701 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.3□□□□□ -0.12
RPS4XP62701 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.3□□□□□ -0.12
RPS4XP62701 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.29□□□□□ -0.12
RPS4XP62701 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.29□□□□□ -0.12
RPS4XP62701 TSPY26P-202ENST00000565928 3884 ntBASIC14.29□□□□□ -0.12
RPS4XP62701 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RPS4XP62701 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RPS4XP62701 DBET-201ENST00000630918 3363 ntBASIC14.29□□□□□ -0.12
RPS4XP62701 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RPS4XP62701 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms