Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
VBP1P61758 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VBP1P61758 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
VBP1P61758 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.26□□□□□ -0.13
VBP1P61758 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 SPDYE13P-201ENST00000445314 798 ntBASIC14.26□□□□□ -0.13
VBP1P61758 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VBP1P61758 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.26□□□□□ -0.13
VBP1P61758 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 LINC01023-201ENST00000606054 436 ntBASIC14.26□□□□□ -0.13
VBP1P61758 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.26□□□□□ -0.13
VBP1P61758 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.26□□□□□ -0.13
VBP1P61758 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
VBP1P61758 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
VBP1P61758 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.26□□□□□ -0.13
VBP1P61758 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.26□□□□□ -0.13
VBP1P61758 COL6A4P2-202ENST00000504443 2753 ntBASIC14.26□□□□□ -0.13
VBP1P61758 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.26□□□□□ -0.13
VBP1P61758 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.26□□□□□ -0.13
VBP1P61758 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.26□□□□□ -0.13
VBP1P61758 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VBP1P61758 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.25□□□□□ -0.13
VBP1P61758 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VBP1P61758 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VBP1P61758 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.25□□□□□ -0.13
VBP1P61758 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.25□□□□□ -0.13
VBP1P61758 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VBP1P61758 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VBP1P61758 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.25□□□□□ -0.13
VBP1P61758 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.25□□□□□ -0.13
VBP1P61758 SNORA78-201ENST00000459373 127 ntBASIC14.25□□□□□ -0.13
VBP1P61758 YBX1P2-201ENST00000489612 999 ntBASIC14.25□□□□□ -0.13
VBP1P61758 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.25□□□□□ -0.13
VBP1P61758 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.25□□□□□ -0.13
VBP1P61758 AC139887.4-201ENST00000607877 719 ntBASIC14.25□□□□□ -0.13
VBP1P61758 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
VBP1P61758 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
VBP1P61758 AC073592.4-201ENST00000623827 446 ntBASIC14.25□□□□□ -0.13
VBP1P61758 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.25□□□□□ -0.13
VBP1P61758 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 REXO1L2P-201ENST00000425429 2069 ntBASIC14.25□□□□□ -0.13
VBP1P61758 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 AC126335.2-201ENST00000623362 4637 ntBASIC14.25□□□□□ -0.13
VBP1P61758 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.25□□□□□ -0.13
VBP1P61758 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.25□□□□□ -0.13
VBP1P61758 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VBP1P61758 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
VBP1P61758 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.24□□□□□ -0.13
VBP1P61758 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.24□□□□□ -0.13
VBP1P61758 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.24□□□□□ -0.13
VBP1P61758 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
VBP1P61758 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms