Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 AC140479.7-201ENST00000636301 2332 ntBASIC13.66□□□□□ -0.22
AP3S2P59780 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
AP3S2P59780 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 AP005901.3-202ENST00000581653 237 ntBASIC13.66□□□□□ -0.22
AP3S2P59780 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.66□□□□□ -0.22
AP3S2P59780 AC041040.2-201ENST00000622926 2899 ntBASIC13.66□□□□□ -0.22
AP3S2P59780 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.66□□□□□ -0.22
AP3S2P59780 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
AP3S2P59780 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.66□□□□□ -0.22
AP3S2P59780 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.66□□□□□ -0.22
AP3S2P59780 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 AC006504.5-208ENST00000588784 2401 ntBASIC13.65□□□□□ -0.22
AP3S2P59780 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.65□□□□□ -0.22
AP3S2P59780 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.65□□□□□ -0.22
AP3S2P59780 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
AP3S2P59780 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AP3S2P59780 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
AP3S2P59780 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
AP3S2P59780 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.65□□□□□ -0.22
AP3S2P59780 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
AP3S2P59780 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.65□□□□□ -0.22
AP3S2P59780 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.65□□□□□ -0.22
AP3S2P59780 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.65□□□□□ -0.22
AP3S2P59780 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.65□□□□□ -0.22
AP3S2P59780 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.65□□□□□ -0.22
AP3S2P59780 AC021097.1-201ENST00000607902 574 ntBASIC13.65□□□□□ -0.22
AP3S2P59780 AC083849.1-201ENST00000615227 514 ntBASIC13.65□□□□□ -0.22
AP3S2P59780 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 AL589182.2-201ENST00000619332 1049 ntBASIC13.65□□□□□ -0.22
AP3S2P59780 AP006294.2-201ENST00000641667 209 ntBASIC13.65□□□□□ -0.22
AP3S2P59780 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.65□□□□□ -0.22
AP3S2P59780 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
AP3S2P59780 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AP3S2P59780 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
AP3S2P59780 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP3S2P59780 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
AP3S2P59780 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.65□□□□□ -0.23
AP3S2P59780 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
AP3S2P59780 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
AP3S2P59780 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.64□□□□□ -0.23
AP3S2P59780 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms