Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC11.79□□□□□ -0.52
CMC4P56277 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.79□□□□□ -0.52
CMC4P56277 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.79□□□□□ -0.52
CMC4P56277 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.79□□□□□ -0.52
CMC4P56277 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC11.79□□□□□ -0.52
CMC4P56277 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.79□□□□□ -0.52
CMC4P56277 AL391825.1-201ENST00000457671 1364 ntBASIC11.79□□□□□ -0.52
CMC4P56277 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CMC4P56277 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
CMC4P56277 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.78□□□□□ -0.52
CMC4P56277 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.78□□□□□ -0.52
CMC4P56277 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.78□□□□□ -0.52
CMC4P56277 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC11.78□□□□□ -0.52
CMC4P56277 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC11.78□□□□□ -0.52
CMC4P56277 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.78□□□□□ -0.52
CMC4P56277 FRMD6-AS1-201ENST00000617151 2229 ntBASIC11.78□□□□□ -0.52
CMC4P56277 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 AC026691.1-201ENST00000602502 2017 ntBASIC11.78□□□□□ -0.52
CMC4P56277 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CMC4P56277 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CMC4P56277 AC087499.6-201ENST00000411576 835 ntBASIC11.78□□□□□ -0.52
CMC4P56277 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.78□□□□□ -0.52
CMC4P56277 TOMM22P5-201ENST00000416399 439 ntBASIC11.78□□□□□ -0.52
CMC4P56277 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.78□□□□□ -0.52
CMC4P56277 AC015922.1-201ENST00000421102 1152 ntBASIC11.78□□□□□ -0.52
CMC4P56277 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CMC4P56277 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.78□□□□□ -0.52
CMC4P56277 TARDBPP1-201ENST00000442013 1203 ntBASIC11.78□□□□□ -0.52
CMC4P56277 TSPY16P-201ENST00000449843 468 ntBASIC11.78□□□□□ -0.52
CMC4P56277 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.78□□□□□ -0.52
CMC4P56277 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.78□□□□□ -0.52
CMC4P56277 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC11.78□□□□□ -0.52
CMC4P56277 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.78□□□□□ -0.52
CMC4P56277 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.78□□□□□ -0.52
CMC4P56277 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.78□□□□□ -0.52
CMC4P56277 SLED1-202ENST00000512051 380 ntBASIC11.78□□□□□ -0.52
CMC4P56277 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.78□□□□□ -0.52
CMC4P56277 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CMC4P56277 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC11.78□□□□□ -0.52
CMC4P56277 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CMC4P56277 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.78□□□□□ -0.52
CMC4P56277 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.78□□□□□ -0.52
CMC4P56277 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.78□□□□□ -0.52
CMC4P56277 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.78□□□□□ -0.52
CMC4P56277 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.78□□□□□ -0.52
CMC4P56277 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC11.78□□□□□ -0.52
CMC4P56277 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CMC4P56277 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
CMC4P56277 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
CMC4P56277 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.77□□□□□ -0.52
CMC4P56277 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CMC4P56277 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CMC4P56277 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CMC4P56277 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.77□□□□□ -0.52
CMC4P56277 PCDHB19P-201ENST00000570871 2371 ntBASIC11.77□□□□□ -0.52
CMC4P56277 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC11.77□□□□□ -0.52
CMC4P56277 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
CMC4P56277 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
CMC4P56277 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CMC4P56277 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CMC4P56277 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CMC4P56277 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CMC4P56277 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CMC4P56277 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CMC4P56277 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CMC4P56277 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.77□□□□□ -0.53
CMC4P56277 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.77□□□□□ -0.53
CMC4P56277 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CMC4P56277 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.77□□□□□ -0.53
CMC4P56277 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms