Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC4P55056 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC11.6□□□□□ -0.55
APOC4P55056 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC4P55056 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC4P55056 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 TARDBPP1-201ENST00000442013 1203 ntBASIC11.6□□□□□ -0.55
APOC4P55056 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.6□□□□□ -0.55
APOC4P55056 RPL13AP25-201ENST00000484130 612 ntBASIC11.6□□□□□ -0.55
APOC4P55056 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC4P55056 AP005018.1-201ENST00000525475 301 ntBASIC11.6□□□□□ -0.55
APOC4P55056 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC4P55056 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.6□□□□□ -0.55
APOC4P55056 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.6□□□□□ -0.55
APOC4P55056 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
APOC4P55056 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC11.6□□□□□ -0.55
APOC4P55056 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
APOC4P55056 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC4P55056 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
APOC4P55056 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 PCDHA12-202ENST00000613593 2588 ntBASIC11.6□□□□□ -0.55
APOC4P55056 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.6□□□□□ -0.55
APOC4P55056 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 GCK-209ENST00000616242 2260 ntTSL 5 BASIC11.6□□□□□ -0.55
APOC4P55056 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC4P55056 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
APOC4P55056 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
APOC4P55056 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.59□□□□□ -0.55
APOC4P55056 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
APOC4P55056 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 AC136604.1-201ENST00000418535 575 ntBASIC11.59□□□□□ -0.55
APOC4P55056 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.59□□□□□ -0.55
APOC4P55056 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.59□□□□□ -0.55
APOC4P55056 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.59□□□□□ -0.55
APOC4P55056 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.59□□□□□ -0.55
APOC4P55056 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.59□□□□□ -0.55
APOC4P55056 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.59□□□□□ -0.55
APOC4P55056 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC11.59□□□□□ -0.55
APOC4P55056 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.59□□□□□ -0.55
APOC4P55056 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.59□□□□□ -0.55
APOC4P55056 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.59□□□□□ -0.55
APOC4P55056 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.59□□□□□ -0.55
APOC4P55056 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.59□□□□□ -0.55
APOC4P55056 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 AL596087.1-201ENST00000400979 1969 ntBASIC11.59□□□□□ -0.55
APOC4P55056 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
APOC4P55056 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.59□□□□□ -0.55
APOC4P55056 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.59□□□□□ -0.55
APOC4P55056 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC4P55056 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
APOC4P55056 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms