Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC22.17■■□□□ 1.14
CLTCL1P53675 HIST2H2BC-201ENST00000498492 580 ntBASIC22.17■■□□□ 1.14
CLTCL1P53675 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
CLTCL1P53675 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CLTCL1P53675 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLTCL1P53675 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC22.17■■□□□ 1.14
CLTCL1P53675 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC22.16■■□□□ 1.14
CLTCL1P53675 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC22.16■■□□□ 1.14
CLTCL1P53675 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CLTCL1P53675 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLTCL1P53675 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.16■■□□□ 1.14
CLTCL1P53675 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
CLTCL1P53675 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC22.16■■□□□ 1.14
CLTCL1P53675 NUS1P3-201ENST00000423502 862 ntBASIC22.16■■□□□ 1.14
CLTCL1P53675 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC22.16■■□□□ 1.14
CLTCL1P53675 AC004898.1-201ENST00000451057 766 ntBASIC22.16■■□□□ 1.14
CLTCL1P53675 SCARNA20.5-201ENST00000516991 142 ntBASIC22.16■■□□□ 1.14
CLTCL1P53675 RNF41-210ENST00000552244 716 ntTSL 3 BASIC22.16■■□□□ 1.14
CLTCL1P53675 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CLTCL1P53675 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CLTCL1P53675 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC22.15■■□□□ 1.14
CLTCL1P53675 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC22.15■■□□□ 1.14
CLTCL1P53675 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC22.15■■□□□ 1.14
CLTCL1P53675 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CLTCL1P53675 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC22.15■■□□□ 1.14
CLTCL1P53675 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 FAM8A4P-201ENST00000435433 1213 ntBASIC22.15■■□□□ 1.14
CLTCL1P53675 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 RHOQP1-201ENST00000555758 579 ntBASIC22.15■■□□□ 1.14
CLTCL1P53675 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CLTCL1P53675 AL022328.3-201ENST00000607943 679 ntBASIC22.15■■□□□ 1.14
CLTCL1P53675 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC22.15■■□□□ 1.14
CLTCL1P53675 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC22.15■■□□□ 1.14
CLTCL1P53675 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC22.15■■□□□ 1.14
CLTCL1P53675 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CLTCL1P53675 AC015818.8-201ENST00000587907 1519 ntBASIC22.15■■□□□ 1.14
CLTCL1P53675 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLTCL1P53675 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CLTCL1P53675 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC22.14■■□□□ 1.14
CLTCL1P53675 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CLTCL1P53675 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLTCL1P53675 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLTCL1P53675 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.14
CLTCL1P53675 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLTCL1P53675 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLTCL1P53675 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC22.14■■□□□ 1.14
CLTCL1P53675 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC22.14■■□□□ 1.14
CLTCL1P53675 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC22.14■■□□□ 1.14
CLTCL1P53675 HIST2H2BB-201ENST00000449108 381 ntBASIC22.14■■□□□ 1.14
CLTCL1P53675 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC22.14■■□□□ 1.14
CLTCL1P53675 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLTCL1P53675 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC22.14■■□□□ 1.14
CLTCL1P53675 AC084346.2-201ENST00000607097 949 ntBASIC22.14■■□□□ 1.14
CLTCL1P53675 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CLTCL1P53675 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
CLTCL1P53675 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLTCL1P53675 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CLTCL1P53675 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC22.14■■□□□ 1.13
CLTCL1P53675 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CLTCL1P53675 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLTCL1P53675 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLTCL1P53675 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLTCL1P53675 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
CLTCL1P53675 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLTCL1P53675 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC22.13■■□□□ 1.13
CLTCL1P53675 KRTAP10-13P-201ENST00000412914 571 ntBASIC22.13■■□□□ 1.13
CLTCL1P53675 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC22.13■■□□□ 1.13
CLTCL1P53675 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CLTCL1P53675 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC22.13■■□□□ 1.13
CLTCL1P53675 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC22.13■■□□□ 1.13
CLTCL1P53675 DUX4L47-201ENST00000566374 394 ntBASIC22.13■■□□□ 1.13
CLTCL1P53675 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC22.13■■□□□ 1.13
CLTCL1P53675 KLK11-210ENST00000600362 759 ntTSL 3 BASIC22.13■■□□□ 1.13
CLTCL1P53675 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC22.13■■□□□ 1.13
CLTCL1P53675 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms