Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.72■□□□□ 0.27
RFC1P35251 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.72■□□□□ 0.27
RFC1P35251 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RFC1P35251 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFC1P35251 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.71■□□□□ 0.27
RFC1P35251 AC020658.6-201ENST00000623564 1870 ntBASIC16.71■□□□□ 0.27
RFC1P35251 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.71■□□□□ 0.27
RFC1P35251 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.71■□□□□ 0.27
RFC1P35251 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RFC1P35251 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RFC1P35251 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
RFC1P35251 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RFC1P35251 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.71■□□□□ 0.27
RFC1P35251 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.71■□□□□ 0.27
RFC1P35251 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.71■□□□□ 0.27
RFC1P35251 HIST3H2BA-201ENST00000436555 524 ntBASIC16.71■□□□□ 0.27
RFC1P35251 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.71■□□□□ 0.27
RFC1P35251 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.71■□□□□ 0.27
RFC1P35251 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 AC139530.3-201ENST00000620344 690 ntBASIC16.71■□□□□ 0.27
RFC1P35251 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 AC136621.1-201ENST00000624017 2304 ntBASIC16.71■□□□□ 0.27
RFC1P35251 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFC1P35251 AC105250.1-201ENST00000509378 2057 ntBASIC16.71■□□□□ 0.27
RFC1P35251 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.71■□□□□ 0.26
RFC1P35251 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
RFC1P35251 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RFC1P35251 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RFC1P35251 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.7■□□□□ 0.26
RFC1P35251 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.7■□□□□ 0.26
RFC1P35251 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.7■□□□□ 0.26
RFC1P35251 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.7■□□□□ 0.26
RFC1P35251 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RFC1P35251 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 SSR4P1-203ENST00000599569 2260 ntBASIC16.7■□□□□ 0.26
RFC1P35251 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.7■□□□□ 0.26
RFC1P35251 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RFC1P35251 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RFC1P35251 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.7■□□□□ 0.26
RFC1P35251 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.7■□□□□ 0.26
RFC1P35251 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.7■□□□□ 0.26
RFC1P35251 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.7■□□□□ 0.26
RFC1P35251 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.7■□□□□ 0.26
RFC1P35251 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.7■□□□□ 0.26
RFC1P35251 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
RFC1P35251 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.7■□□□□ 0.26
RFC1P35251 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 AC073347.1-201ENST00000421633 2643 ntBASIC16.7■□□□□ 0.26
RFC1P35251 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.7■□□□□ 0.26
RFC1P35251 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.7■□□□□ 0.26
RFC1P35251 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RFC1P35251 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.7■□□□□ 0.26
RFC1P35251 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.7■□□□□ 0.26
RFC1P35251 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RFC1P35251 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.7■□□□□ 0.26
RFC1P35251 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFC1P35251 LINC00554-201ENST00000564841 3011 ntBASIC16.7■□□□□ 0.26
RFC1P35251 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.69■□□□□ 0.26
RFC1P35251 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.69■□□□□ 0.26
RFC1P35251 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RFC1P35251 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RFC1P35251 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.69■□□□□ 0.26
RFC1P35251 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms