Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF1P30408 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
TM4SF1P30408 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF1P30408 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF1P30408 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.33■□□□□ 0.69
TM4SF1P30408 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF1P30408 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF1P30408 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF1P30408 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF1P30408 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.33■□□□□ 0.69
TM4SF1P30408 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF1P30408 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF1P30408 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF1P30408 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF1P30408 MPV17-204ENST00000399052 749 ntTSL 4 BASIC19.33■□□□□ 0.68
TM4SF1P30408 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.33■□□□□ 0.68
TM4SF1P30408 POM121L8P-201ENST00000417732 1281 ntBASIC19.33■□□□□ 0.68
TM4SF1P30408 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.33■□□□□ 0.68
TM4SF1P30408 POM121L9P-203ENST00000441984 1285 ntBASIC19.33■□□□□ 0.68
TM4SF1P30408 CHMP1AP1-201ENST00000445563 662 ntBASIC19.33■□□□□ 0.68
TM4SF1P30408 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF1P30408 LDHBP1-201ENST00000455730 1119 ntBASIC19.33■□□□□ 0.68
TM4SF1P30408 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF1P30408 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.33■□□□□ 0.68
TM4SF1P30408 FTLP10-202ENST00000505798 471 ntBASIC19.33■□□□□ 0.68
TM4SF1P30408 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.33■□□□□ 0.68
TM4SF1P30408 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.33■□□□□ 0.68
TM4SF1P30408 AL645939.5-201ENST00000606834 243 ntBASIC19.33■□□□□ 0.68
TM4SF1P30408 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF1P30408 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TM4SF1P30408 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.33■□□□□ 0.68
TM4SF1P30408 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF1P30408 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.33■□□□□ 0.68
TM4SF1P30408 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF1P30408 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF1P30408 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF1P30408 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.33■□□□□ 0.68
TM4SF1P30408 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF1P30408 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF1P30408 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF1P30408 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF1P30408 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
TM4SF1P30408 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF1P30408 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF1P30408 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF1P30408 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TM4SF1P30408 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF1P30408 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF1P30408 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.32■□□□□ 0.68
TM4SF1P30408 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF1P30408 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.32■□□□□ 0.68
TM4SF1P30408 AC022217.1-201ENST00000521069 738 ntBASIC19.32■□□□□ 0.68
TM4SF1P30408 AC134698.3-201ENST00000523880 214 ntBASIC19.32■□□□□ 0.68
TM4SF1P30408 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF1P30408 MIR3907-201ENST00000579424 151 ntBASIC19.32■□□□□ 0.68
TM4SF1P30408 RN7SL574P-201ENST00000581512 297 ntBASIC19.32■□□□□ 0.68
TM4SF1P30408 AC022748.3-201ENST00000621828 275 ntBASIC19.32■□□□□ 0.68
TM4SF1P30408 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF1P30408 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF1P30408 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF1P30408 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF1P30408 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TM4SF1P30408 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.32■□□□□ 0.68
TM4SF1P30408 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF1P30408 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF1P30408 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.31■□□□□ 0.68
TM4SF1P30408 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF1P30408 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TM4SF1P30408 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF1P30408 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TM4SF1P30408 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.31■□□□□ 0.68
TM4SF1P30408 AC092978.1-202ENST00000637590 1327 ntBASIC19.31■□□□□ 0.68
TM4SF1P30408 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF1P30408 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF1P30408 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF1P30408 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TM4SF1P30408 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF1P30408 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
TM4SF1P30408 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
TM4SF1P30408 AL645937.2-201ENST00000396808 931 ntBASIC19.31■□□□□ 0.68
TM4SF1P30408 AL008707.1-201ENST00000422498 534 ntBASIC19.31■□□□□ 0.68
TM4SF1P30408 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.31■□□□□ 0.68
TM4SF1P30408 AC100850.1-201ENST00000506768 649 ntBASIC19.31■□□□□ 0.68
TM4SF1P30408 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.31■□□□□ 0.68
TM4SF1P30408 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.31■□□□□ 0.68
TM4SF1P30408 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19.31■□□□□ 0.68
TM4SF1P30408 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF1P30408 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.31■□□□□ 0.68
TM4SF1P30408 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.31■□□□□ 0.68
TM4SF1P30408 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF1P30408 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF1P30408 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF1P30408 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TM4SF1P30408 AC007787.1-201ENST00000588095 1583 ntBASIC19.31■□□□□ 0.68
TM4SF1P30408 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF1P30408 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF1P30408 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.31■□□□□ 0.68
TM4SF1P30408 LRRC59-203ENST00000576448 1531 ntBASIC19.3■□□□□ 0.68
TM4SF1P30408 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
TM4SF1P30408 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms