Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 AL137784.3-201ENST00000623858 2288 ntBASIC15.66■□□□□ 0.1
VARSP26640 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VARSP26640 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
VARSP26640 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.66■□□□□ 0.1
VARSP26640 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.66■□□□□ 0.1
VARSP26640 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
VARSP26640 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
VARSP26640 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VARSP26640 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VARSP26640 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.66■□□□□ 0.1
VARSP26640 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.66■□□□□ 0.1
VARSP26640 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.66■□□□□ 0.1
VARSP26640 AC098859.1-201ENST00000502915 1238 ntBASIC15.66■□□□□ 0.1
VARSP26640 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.66■□□□□ 0.1
VARSP26640 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.66■□□□□ 0.1
VARSP26640 AC022145.2-201ENST00000598203 171 ntBASIC15.66■□□□□ 0.1
VARSP26640 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 UXT-AS1-201ENST00000590504 1525 ntBASIC15.66■□□□□ 0.1
VARSP26640 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VARSP26640 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.66■□□□□ 0.1
VARSP26640 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.66■□□□□ 0.1
VARSP26640 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.66■□□□□ 0.1
VARSP26640 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
VARSP26640 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VARSP26640 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VARSP26640 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.65■□□□□ 0.1
VARSP26640 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.65■□□□□ 0.1
VARSP26640 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.65■□□□□ 0.1
VARSP26640 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.65■□□□□ 0.1
VARSP26640 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VARSP26640 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 MIR346-201ENST00000362234 95 ntBASIC15.65■□□□□ 0.1
VARSP26640 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.65■□□□□ 0.1
VARSP26640 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 CNN2P2-201ENST00000443536 909 ntBASIC15.65■□□□□ 0.1
VARSP26640 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.65■□□□□ 0.1
VARSP26640 CNN2P3-201ENST00000450201 906 ntBASIC15.65■□□□□ 0.1
VARSP26640 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.65■□□□□ 0.1
VARSP26640 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
VARSP26640 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.65■□□□□ 0.1
VARSP26640 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.65■□□□□ 0.1
VARSP26640 AC138761.1-201ENST00000584393 385 ntBASIC15.65■□□□□ 0.1
VARSP26640 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.65■□□□□ 0.1
VARSP26640 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.65■□□□□ 0.1
VARSP26640 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.65■□□□□ 0.1
VARSP26640 MIR4321-201ENST00000592276 80 ntBASIC15.65■□□□□ 0.1
VARSP26640 AL365330.1-201ENST00000607459 531 ntBASIC15.65■□□□□ 0.1
VARSP26640 AL136317.3-201ENST00000618497 906 ntBASIC15.65■□□□□ 0.1
VARSP26640 PAX6-247ENST00000638965 979 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 AP003680.1-201ENST00000598970 3660 ntBASIC15.65■□□□□ 0.1
VARSP26640 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 AC063926.2-201ENST00000623766 1308 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms