Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AL158211.3-201ENST00000607385 239 ntBASIC16.62■□□□□ 0.25
MMP8P22894 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP8P22894 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP8P22894 AC006538.3-201ENST00000612495 578 ntBASIC16.62■□□□□ 0.25
MMP8P22894 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP8P22894 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP8P22894 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP8P22894 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP8P22894 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP8P22894 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP8P22894 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP8P22894 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
MMP8P22894 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MMP8P22894 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
MMP8P22894 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.61■□□□□ 0.25
MMP8P22894 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 AC097493.3-201ENST00000509725 367 ntBASIC16.61■□□□□ 0.25
MMP8P22894 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.61■□□□□ 0.25
MMP8P22894 AC027369.6-201ENST00000525520 931 ntBASIC16.61■□□□□ 0.25
MMP8P22894 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MMP8P22894 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
MMP8P22894 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP8P22894 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MMP8P22894 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MMP8P22894 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP8P22894 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP8P22894 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP8P22894 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.6■□□□□ 0.25
MMP8P22894 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.6■□□□□ 0.25
MMP8P22894 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP8P22894 RPL13P2-201ENST00000440687 659 ntBASIC16.6■□□□□ 0.25
MMP8P22894 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.6■□□□□ 0.25
MMP8P22894 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP8P22894 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.6■□□□□ 0.25
MMP8P22894 RN7SL618P-201ENST00000477850 296 ntBASIC16.6■□□□□ 0.25
MMP8P22894 SLED1-202ENST00000512051 380 ntBASIC16.6■□□□□ 0.25
MMP8P22894 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP8P22894 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.6■□□□□ 0.25
MMP8P22894 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.6■□□□□ 0.25
MMP8P22894 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 AL844908.2-201ENST00000609461 460 ntBASIC16.6■□□□□ 0.25
MMP8P22894 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MMP8P22894 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.6■□□□□ 0.25
MMP8P22894 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP8P22894 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.6■□□□□ 0.25
MMP8P22894 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 AC087499.5-201ENST00000452760 1342 ntBASIC16.6■□□□□ 0.25
MMP8P22894 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MMP8P22894 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP8P22894 KRT8P44-201ENST00000441609 1350 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms