Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B1P20020 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ATP2B1P20020 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2B1P20020 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B1P20020 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B1P20020 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2B1P20020 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP2B1P20020 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ATP2B1P20020 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B1P20020 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP2B1P20020 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2B1P20020 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2B1P20020 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B1P20020 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B1P20020 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP2B1P20020 AC011477.6-201ENST00000604980 1927 ntBASIC18.31■□□□□ 0.52
ATP2B1P20020 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ATP2B1P20020 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ATP2B1P20020 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2B1P20020 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2B1P20020 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2B1P20020 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2B1P20020 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP2B1P20020 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 REXO1L1P-202ENST00000608646 1974 ntBASIC18.3■□□□□ 0.52
ATP2B1P20020 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATP2B1P20020 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP2B1P20020 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP2B1P20020 BANF1P1-201ENST00000553684 263 ntBASIC18.3■□□□□ 0.52
ATP2B1P20020 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.3■□□□□ 0.52
ATP2B1P20020 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP2B1P20020 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.3■□□□□ 0.52
ATP2B1P20020 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2B1P20020 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ATP2B1P20020 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ATP2B1P20020 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ATP2B1P20020 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2B1P20020 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2B1P20020 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2B1P20020 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP2B1P20020 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2B1P20020 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2B1P20020 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ATP2B1P20020 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2B1P20020 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ATP2B1P20020 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2B1P20020 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2B1P20020 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2B1P20020 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 AC004987.2-201ENST00000395959 1148 ntBASIC18.29■□□□□ 0.52
ATP2B1P20020 TSEN15P1-201ENST00000423257 515 ntBASIC18.29■□□□□ 0.52
ATP2B1P20020 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP2B1P20020 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2B1P20020 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.29■□□□□ 0.52
ATP2B1P20020 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP2B1P20020 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2B1P20020 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 AC004449.1-201ENST00000564240 433 ntBASIC18.29■□□□□ 0.52
ATP2B1P20020 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP2B1P20020 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2B1P20020 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2B1P20020 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
ATP2B1P20020 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2B1P20020 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2B1P20020 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2B1P20020 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B1P20020 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B1P20020 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B1P20020 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B1P20020 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B1P20020 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ATP2B1P20020 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B1P20020 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ATP2B1P20020 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms