Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTLA4P16410 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.07□□□□□ -0.16
CTLA4P16410 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CTLA4P16410 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.06□□□□□ -0.16
CTLA4P16410 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CTLA4P16410 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CTLA4P16410 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.06□□□□□ -0.16
CTLA4P16410 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.06□□□□□ -0.16
CTLA4P16410 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.06□□□□□ -0.16
CTLA4P16410 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CTLA4P16410 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.06□□□□□ -0.16
CTLA4P16410 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
CTLA4P16410 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.06□□□□□ -0.16
CTLA4P16410 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.06□□□□□ -0.16
CTLA4P16410 AC009093.7-201ENST00000623853 1223 ntBASIC14.06□□□□□ -0.16
CTLA4P16410 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.06□□□□□ -0.16
CTLA4P16410 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.06□□□□□ -0.16
CTLA4P16410 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.06□□□□□ -0.16
CTLA4P16410 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CTLA4P16410 AC023824.1-201ENST00000562945 2975 ntBASIC14.06□□□□□ -0.16
CTLA4P16410 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.06□□□□□ -0.16
CTLA4P16410 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 TNRC18P2-201ENST00000417666 2714 ntBASIC14.06□□□□□ -0.16
CTLA4P16410 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTLA4P16410 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.05□□□□□ -0.16
CTLA4P16410 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.05□□□□□ -0.16
CTLA4P16410 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.05□□□□□ -0.16
CTLA4P16410 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.05□□□□□ -0.16
CTLA4P16410 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CTLA4P16410 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.05□□□□□ -0.16
CTLA4P16410 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CTLA4P16410 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.05□□□□□ -0.16
CTLA4P16410 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.05□□□□□ -0.16
CTLA4P16410 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CTLA4P16410 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.05□□□□□ -0.16
CTLA4P16410 AC211486.1-202ENST00000416371 468 ntBASIC14.05□□□□□ -0.16
CTLA4P16410 AC136604.1-201ENST00000418535 575 ntBASIC14.05□□□□□ -0.16
CTLA4P16410 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.05□□□□□ -0.16
CTLA4P16410 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.05□□□□□ -0.16
CTLA4P16410 AC023141.5-201ENST00000458585 616 ntBASIC14.05□□□□□ -0.16
CTLA4P16410 AC211476.1-201ENST00000503899 468 ntBASIC14.05□□□□□ -0.16
CTLA4P16410 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.05□□□□□ -0.16
CTLA4P16410 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CTLA4P16410 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CTLA4P16410 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
CTLA4P16410 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.05□□□□□ -0.16
CTLA4P16410 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.05□□□□□ -0.16
CTLA4P16410 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CTLA4P16410 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CTLA4P16410 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CTLA4P16410 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTLA4P16410 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CTLA4P16410 AL607033.1-201ENST00000623900 1599 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms