Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DOBP13765 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DOBP13765 AL035456.1-201ENST00000456064 1369 ntBASIC14.22□□□□□ -0.13
HLA-DOBP13765 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 SPDYE17-201ENST00000412399 783 ntBASIC14.21□□□□□ -0.13
HLA-DOBP13765 HIST3H2BA-201ENST00000436555 524 ntBASIC14.21□□□□□ -0.13
HLA-DOBP13765 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 AC004449.1-201ENST00000564240 433 ntBASIC14.21□□□□□ -0.13
HLA-DOBP13765 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DOBP13765 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DOBP13765 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.21□□□□□ -0.14
HLA-DOBP13765 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.21□□□□□ -0.14
HLA-DOBP13765 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DOBP13765 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DOBP13765 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.21□□□□□ -0.14
HLA-DOBP13765 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DOBP13765 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
HLA-DOBP13765 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
HLA-DOBP13765 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.21□□□□□ -0.14
HLA-DOBP13765 DBET-201ENST00000630918 3363 ntBASIC14.2□□□□□ -0.14
HLA-DOBP13765 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 AC090616.6-203ENST00000579186 1945 ntBASIC14.2□□□□□ -0.14
HLA-DOBP13765 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 HNRNPUP1-201ENST00000554987 333 ntBASIC14.2□□□□□ -0.14
HLA-DOBP13765 AL079307.3-201ENST00000556114 283 ntBASIC14.2□□□□□ -0.14
HLA-DOBP13765 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 AC097359.3-201ENST00000603982 1210 ntBASIC14.2□□□□□ -0.14
HLA-DOBP13765 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 AC093028.1-201ENST00000622998 982 ntBASIC14.2□□□□□ -0.14
HLA-DOBP13765 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DOBP13765 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 AP002414.2-201ENST00000591780 3365 ntBASIC14.2□□□□□ -0.14
HLA-DOBP13765 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DOBP13765 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms