Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.63■□□□□ 0.41
COL11A1P12107 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.63■□□□□ 0.41
COL11A1P12107 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
COL11A1P12107 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL11A1P12107 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.63■□□□□ 0.41
COL11A1P12107 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
COL11A1P12107 AC092127.1-201ENST00000567093 3455 ntBASIC17.62■□□□□ 0.41
COL11A1P12107 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
COL11A1P12107 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COL11A1P12107 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.62■□□□□ 0.41
COL11A1P12107 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.62■□□□□ 0.41
COL11A1P12107 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.62■□□□□ 0.41
COL11A1P12107 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
COL11A1P12107 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.62■□□□□ 0.41
COL11A1P12107 HLA-K-203ENST00000430151 1046 ntBASIC17.62■□□□□ 0.41
COL11A1P12107 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.62■□□□□ 0.41
COL11A1P12107 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.62■□□□□ 0.41
COL11A1P12107 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.62■□□□□ 0.41
COL11A1P12107 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.62■□□□□ 0.41
COL11A1P12107 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.62■□□□□ 0.41
COL11A1P12107 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.62■□□□□ 0.41
COL11A1P12107 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.62■□□□□ 0.41
COL11A1P12107 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.62■□□□□ 0.41
COL11A1P12107 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.62■□□□□ 0.41
COL11A1P12107 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.62■□□□□ 0.41
COL11A1P12107 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 AC007787.1-201ENST00000588095 1583 ntBASIC17.62■□□□□ 0.41
COL11A1P12107 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL11A1P12107 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 AC079328.2-201ENST00000561241 3354 ntBASIC17.61■□□□□ 0.41
COL11A1P12107 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COL11A1P12107 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.61■□□□□ 0.41
COL11A1P12107 AHCYP2-201ENST00000430630 1300 ntBASIC17.61■□□□□ 0.41
COL11A1P12107 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.61■□□□□ 0.41
COL11A1P12107 AL354877.1-201ENST00000424412 413 ntBASIC17.61■□□□□ 0.41
COL11A1P12107 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.61■□□□□ 0.41
COL11A1P12107 Z93015.1-201ENST00000451718 390 ntBASIC17.61■□□□□ 0.41
COL11A1P12107 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.61■□□□□ 0.41
COL11A1P12107 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.61■□□□□ 0.41
COL11A1P12107 EEF1DP1-201ENST00000585891 896 ntBASIC17.61■□□□□ 0.41
COL11A1P12107 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.61■□□□□ 0.41
COL11A1P12107 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
COL11A1P12107 AL023775.1-201ENST00000454907 1746 ntBASIC17.61■□□□□ 0.41
COL11A1P12107 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.61■□□□□ 0.41
COL11A1P12107 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.61■□□□□ 0.41
COL11A1P12107 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
COL11A1P12107 AL591846.1-201ENST00000451736 433 ntBASIC17.61■□□□□ 0.41
COL11A1P12107 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.61■□□□□ 0.41
COL11A1P12107 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.61■□□□□ 0.41
COL11A1P12107 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
COL11A1P12107 PPY2P-201ENST00000582808 702 ntBASIC17.61■□□□□ 0.41
COL11A1P12107 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.61■□□□□ 0.41
COL11A1P12107 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL11A1P12107 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
COL11A1P12107 AC132938.4-201ENST00000623835 848 ntBASIC17.61■□□□□ 0.41
COL11A1P12107 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.61■□□□□ 0.41
COL11A1P12107 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.61■□□□□ 0.41
COL11A1P12107 AC018735.1-201ENST00000437208 1502 ntBASIC17.6■□□□□ 0.41
COL11A1P12107 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL11A1P12107 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms