Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.96□□□□□ -0.17
UBCP0CG48 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
UBCP0CG48 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.96□□□□□ -0.18
UBCP0CG48 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.96□□□□□ -0.18
UBCP0CG48 SNX18-202ENST00000343017 3140 ntBASIC13.96□□□□□ -0.18
UBCP0CG48 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
UBCP0CG48 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBCP0CG48 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
UBCP0CG48 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBCP0CG48 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
UBCP0CG48 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBCP0CG48 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBCP0CG48 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
UBCP0CG48 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.95□□□□□ -0.18
UBCP0CG48 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
UBCP0CG48 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
UBCP0CG48 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.95□□□□□ -0.18
UBCP0CG48 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
UBCP0CG48 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 CICP4-201ENST00000447359 2812 ntBASIC13.95□□□□□ -0.18
UBCP0CG48 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.95□□□□□ -0.18
UBCP0CG48 AC074386.1-202ENST00000463561 864 ntBASIC13.95□□□□□ -0.18
UBCP0CG48 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.95□□□□□ -0.18
UBCP0CG48 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
UBCP0CG48 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.95□□□□□ -0.18
UBCP0CG48 RARRES2P8-201ENST00000566335 367 ntBASIC13.95□□□□□ -0.18
UBCP0CG48 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.95□□□□□ -0.18
UBCP0CG48 AC061975.2-201ENST00000581722 295 ntBASIC13.95□□□□□ -0.18
UBCP0CG48 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.95□□□□□ -0.18
UBCP0CG48 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.95□□□□□ -0.18
UBCP0CG48 SPTSSB-204ENST00000617024 1292 ntBASIC13.95□□□□□ -0.18
UBCP0CG48 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 AC092127.1-201ENST00000567093 3455 ntBASIC13.95□□□□□ -0.18
UBCP0CG48 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 AC104109.2-201ENST00000602919 1418 ntBASIC13.95□□□□□ -0.18
UBCP0CG48 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
UBCP0CG48 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.95□□□□□ -0.18
UBCP0CG48 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.95□□□□□ -0.18
UBCP0CG48 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBCP0CG48 AC026748.1-201ENST00000624349 3251 ntBASIC13.95□□□□□ -0.18
UBCP0CG48 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
UBCP0CG48 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.94□□□□□ -0.18
UBCP0CG48 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 AC007292.2-201ENST00000593524 1812 ntBASIC13.94□□□□□ -0.18
UBCP0CG48 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.94□□□□□ -0.18
UBCP0CG48 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.94□□□□□ -0.18
UBCP0CG48 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.94□□□□□ -0.18
UBCP0CG48 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.94□□□□□ -0.18
UBCP0CG48 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UBCP0CG48 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.94□□□□□ -0.18
UBCP0CG48 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBCP0CG48 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.94□□□□□ -0.18
UBCP0CG48 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms