Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CD4P01730 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.38■□□□□ 0.37
CD4P01730 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.38■□□□□ 0.37
CD4P01730 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 MIR326-201ENST00000362220 95 ntBASIC17.38■□□□□ 0.37
CD4P01730 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.38■□□□□ 0.37
CD4P01730 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.38■□□□□ 0.37
CD4P01730 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.38■□□□□ 0.37
CD4P01730 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.38■□□□□ 0.37
CD4P01730 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.38■□□□□ 0.37
CD4P01730 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CD4P01730 HNRNPUP1-201ENST00000554987 333 ntBASIC17.38■□□□□ 0.37
CD4P01730 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.38■□□□□ 0.37
CD4P01730 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.38■□□□□ 0.37
CD4P01730 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.38■□□□□ 0.37
CD4P01730 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CD4P01730 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
CD4P01730 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CD4P01730 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.38■□□□□ 0.37
CD4P01730 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CD4P01730 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.38■□□□□ 0.37
CD4P01730 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CD4P01730 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CD4P01730 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CD4P01730 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.38■□□□□ 0.37
CD4P01730 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.38■□□□□ 0.37
CD4P01730 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.38■□□□□ 0.37
CD4P01730 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.38■□□□□ 0.37
CD4P01730 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CD4P01730 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.37■□□□□ 0.37
CD4P01730 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.37■□□□□ 0.37
CD4P01730 AC006449.6-201ENST00000612330 2296 ntBASIC17.37■□□□□ 0.37
CD4P01730 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.37■□□□□ 0.37
CD4P01730 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.37■□□□□ 0.37
CD4P01730 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.37■□□□□ 0.37
CD4P01730 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CD4P01730 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CD4P01730 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CD4P01730 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CD4P01730 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.37■□□□□ 0.37
CD4P01730 C2orf27AP3-201ENST00000434123 579 ntBASIC17.37■□□□□ 0.37
CD4P01730 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.37■□□□□ 0.37
CD4P01730 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.37■□□□□ 0.37
CD4P01730 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CD4P01730 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.37■□□□□ 0.37
CD4P01730 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.37■□□□□ 0.37
CD4P01730 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.37■□□□□ 0.37
CD4P01730 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.37■□□□□ 0.37
CD4P01730 AC023310.1-201ENST00000554836 735 ntBASIC17.37■□□□□ 0.37
CD4P01730 RHOQP1-201ENST00000555758 579 ntBASIC17.37■□□□□ 0.37
CD4P01730 AL354718.3-201ENST00000616414 581 ntBASIC17.37■□□□□ 0.37
CD4P01730 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.37■□□□□ 0.37
CD4P01730 CR382287.1-201ENST00000623954 586 ntBASIC17.37■□□□□ 0.37
CD4P01730 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CD4P01730 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CD4P01730 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.37■□□□□ 0.37
CD4P01730 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD4P01730 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CD4P01730 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CD4P01730 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.36■□□□□ 0.37
CD4P01730 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.36■□□□□ 0.37
CD4P01730 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CD4P01730 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.36■□□□□ 0.37
CD4P01730 AC006001.1-201ENST00000325130 474 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms