Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TOP3BO95985 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TOP3BO95985 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.28■□□□□ 0.2
TOP3BO95985 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.28■□□□□ 0.2
TOP3BO95985 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TOP3BO95985 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.28■□□□□ 0.2
TOP3BO95985 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.28■□□□□ 0.2
TOP3BO95985 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.28■□□□□ 0.2
TOP3BO95985 API5-211ENST00000534695 560 ntTSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.28■□□□□ 0.2
TOP3BO95985 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.28■□□□□ 0.2
TOP3BO95985 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.28■□□□□ 0.2
TOP3BO95985 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 SPDYE12P-201ENST00000618416 771 ntBASIC16.28■□□□□ 0.2
TOP3BO95985 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TOP3BO95985 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TOP3BO95985 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.28■□□□□ 0.2
TOP3BO95985 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 AC012569.1-201ENST00000591191 1524 ntBASIC16.28■□□□□ 0.2
TOP3BO95985 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.28■□□□□ 0.2
TOP3BO95985 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TOP3BO95985 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
TOP3BO95985 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
TOP3BO95985 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOP3BO95985 AC016027.1-202ENST00000607927 1699 ntBASIC16.27■□□□□ 0.2
TOP3BO95985 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.27■□□□□ 0.2
TOP3BO95985 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TOP3BO95985 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOP3BO95985 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TOP3BO95985 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOP3BO95985 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOP3BO95985 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.27■□□□□ 0.2
TOP3BO95985 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TOP3BO95985 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOP3BO95985 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOP3BO95985 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.27■□□□□ 0.2
TOP3BO95985 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOP3BO95985 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOP3BO95985 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TOP3BO95985 DGCR5-201ENST00000399539 862 ntBASIC16.27■□□□□ 0.2
TOP3BO95985 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TOP3BO95985 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOP3BO95985 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.27■□□□□ 0.2
TOP3BO95985 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
TOP3BO95985 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.27■□□□□ 0.2
TOP3BO95985 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.27■□□□□ 0.2
TOP3BO95985 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.27■□□□□ 0.2
TOP3BO95985 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOP3BO95985 MIR4515-201ENST00000584082 81 ntBASIC16.27■□□□□ 0.2
TOP3BO95985 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.27■□□□□ 0.2
TOP3BO95985 TNRC18P2-201ENST00000417666 2714 ntBASIC16.27■□□□□ 0.19
TOP3BO95985 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TOP3BO95985 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TOP3BO95985 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.27■□□□□ 0.19
TOP3BO95985 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TOP3BO95985 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TOP3BO95985 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TOP3BO95985 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TOP3BO95985 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.27■□□□□ 0.19
TOP3BO95985 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
TOP3BO95985 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TOP3BO95985 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TOP3BO95985 AC136621.1-201ENST00000624017 2304 ntBASIC16.27■□□□□ 0.19
TOP3BO95985 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOP3BO95985 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOP3BO95985 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOP3BO95985 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TOP3BO95985 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOP3BO95985 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOP3BO95985 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms