Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.14□□□□□ -0.15
CNOT4O95628 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 CR383656.12-201ENST00000549567 513 ntBASIC14.14□□□□□ -0.15
CNOT4O95628 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.14□□□□□ -0.15
CNOT4O95628 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.14□□□□□ -0.15
CNOT4O95628 AL844908.2-201ENST00000609461 460 ntBASIC14.14□□□□□ -0.15
CNOT4O95628 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CNOT4O95628 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.14□□□□□ -0.15
CNOT4O95628 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.14□□□□□ -0.15
CNOT4O95628 AL136982.4-201ENST00000437689 1740 ntBASIC14.14□□□□□ -0.15
CNOT4O95628 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.14□□□□□ -0.15
CNOT4O95628 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CNOT4O95628 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.14□□□□□ -0.15
CNOT4O95628 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.14□□□□□ -0.15
CNOT4O95628 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CNOT4O95628 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.14□□□□□ -0.15
CNOT4O95628 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.14□□□□□ -0.15
CNOT4O95628 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.14□□□□□ -0.15
CNOT4O95628 AC005052.1-201ENST00000625181 2492 ntBASIC14.14□□□□□ -0.15
CNOT4O95628 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNOT4O95628 AL662844.4-201ENST00000606367 2838 ntBASIC14.14□□□□□ -0.15
CNOT4O95628 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CNOT4O95628 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CNOT4O95628 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.13□□□□□ -0.15
CNOT4O95628 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.13□□□□□ -0.15
CNOT4O95628 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.13□□□□□ -0.15
CNOT4O95628 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 OR8S1-201ENST00000310194 1080 ntBASIC14.13□□□□□ -0.15
CNOT4O95628 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CNOT4O95628 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.13□□□□□ -0.15
CNOT4O95628 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.13□□□□□ -0.15
CNOT4O95628 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.13□□□□□ -0.15
CNOT4O95628 SDHAP3-202ENST00000515467 728 ntBASIC14.13□□□□□ -0.15
CNOT4O95628 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.13□□□□□ -0.15
CNOT4O95628 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.13□□□□□ -0.15
CNOT4O95628 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.13□□□□□ -0.15
CNOT4O95628 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CNOT4O95628 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CNOT4O95628 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CNOT4O95628 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CNOT4O95628 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.13□□□□□ -0.15
CNOT4O95628 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNOT4O95628 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
CNOT4O95628 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.12□□□□□ -0.15
CNOT4O95628 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.12□□□□□ -0.15
CNOT4O95628 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CNOT4O95628 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.12□□□□□ -0.15
CNOT4O95628 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.12□□□□□ -0.15
CNOT4O95628 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.12□□□□□ -0.15
CNOT4O95628 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms