Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM4O75871 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CEACAM4O75871 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CEACAM4O75871 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM4O75871 AC106820.2-201ENST00000563775 3264 ntBASIC14.23□□□□□ -0.13
CEACAM4O75871 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.22□□□□□ -0.13
CEACAM4O75871 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.22□□□□□ -0.13
CEACAM4O75871 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.22□□□□□ -0.13
CEACAM4O75871 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.22□□□□□ -0.13
CEACAM4O75871 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CEACAM4O75871 AC015818.8-201ENST00000587907 1519 ntBASIC14.22□□□□□ -0.13
CEACAM4O75871 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.22□□□□□ -0.13
CEACAM4O75871 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.22□□□□□ -0.13
CEACAM4O75871 KLF2P2-201ENST00000416807 1039 ntBASIC14.22□□□□□ -0.13
CEACAM4O75871 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.22□□□□□ -0.13
CEACAM4O75871 MTX1P1-201ENST00000440904 838 ntBASIC14.22□□□□□ -0.13
CEACAM4O75871 HOMER2P2-201ENST00000451621 847 ntBASIC14.22□□□□□ -0.13
CEACAM4O75871 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.22□□□□□ -0.13
CEACAM4O75871 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 RPSAP36-202ENST00000494591 1261 ntBASIC14.22□□□□□ -0.13
CEACAM4O75871 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.22□□□□□ -0.13
CEACAM4O75871 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.22□□□□□ -0.13
CEACAM4O75871 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.22□□□□□ -0.13
CEACAM4O75871 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 AP006547.1-201ENST00000563435 692 ntBASIC14.22□□□□□ -0.13
CEACAM4O75871 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.22□□□□□ -0.13
CEACAM4O75871 MIR4741-201ENST00000579822 90 ntBASIC14.22□□□□□ -0.13
CEACAM4O75871 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.22□□□□□ -0.13
CEACAM4O75871 AC244452.3-201ENST00000636814 210 ntBASIC14.22□□□□□ -0.13
CEACAM4O75871 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CEACAM4O75871 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CEACAM4O75871 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CEACAM4O75871 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM4O75871 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM4O75871 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CEACAM4O75871 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.21□□□□□ -0.13
CEACAM4O75871 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM4O75871 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CEACAM4O75871 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM4O75871 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CEACAM4O75871 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 RNU1-114P-201ENST00000365297 166 ntBASIC14.21□□□□□ -0.13
CEACAM4O75871 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM4O75871 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.21□□□□□ -0.13
CEACAM4O75871 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.21□□□□□ -0.13
CEACAM4O75871 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CEACAM4O75871 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.21□□□□□ -0.13
CEACAM4O75871 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.21□□□□□ -0.13
CEACAM4O75871 AL590640.2-201ENST00000457038 527 ntBASIC14.21□□□□□ -0.13
CEACAM4O75871 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.21□□□□□ -0.13
CEACAM4O75871 AC091804.1-201ENST00000486888 567 ntBASIC14.21□□□□□ -0.13
CEACAM4O75871 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM4O75871 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM4O75871 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.21□□□□□ -0.13
CEACAM4O75871 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CEACAM4O75871 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM4O75871 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.21□□□□□ -0.13
CEACAM4O75871 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.21□□□□□ -0.13
CEACAM4O75871 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.21□□□□□ -0.13
CEACAM4O75871 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM4O75871 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.21□□□□□ -0.13
CEACAM4O75871 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.21□□□□□ -0.13
CEACAM4O75871 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CEACAM4O75871 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CEACAM4O75871 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM4O75871 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms