Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL13O43927 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CXCL13O43927 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CXCL13O43927 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CXCL13O43927 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.17□□□□□ -0.14
CXCL13O43927 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.17□□□□□ -0.14
CXCL13O43927 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCL13O43927 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.17□□□□□ -0.14
CXCL13O43927 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.17□□□□□ -0.14
CXCL13O43927 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCL13O43927 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CXCL13O43927 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CXCL13O43927 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.17□□□□□ -0.14
CXCL13O43927 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.17□□□□□ -0.14
CXCL13O43927 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.17□□□□□ -0.14
CXCL13O43927 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CXCL13O43927 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CXCL13O43927 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL13O43927 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.17□□□□□ -0.14
CXCL13O43927 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCL13O43927 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCL13O43927 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CXCL13O43927 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CXCL13O43927 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CXCL13O43927 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CXCL13O43927 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.16□□□□□ -0.14
CXCL13O43927 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CXCL13O43927 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CXCL13O43927 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CXCL13O43927 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CXCL13O43927 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.16□□□□□ -0.14
CXCL13O43927 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.16□□□□□ -0.14
CXCL13O43927 RPL13P2-201ENST00000440687 659 ntBASIC14.16□□□□□ -0.14
CXCL13O43927 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.16□□□□□ -0.14
CXCL13O43927 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.16□□□□□ -0.14
CXCL13O43927 TPRX2P-201ENST00000535362 881 ntBASIC14.16□□□□□ -0.14
CXCL13O43927 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CXCL13O43927 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 AC092337.1-201ENST00000568699 1129 ntBASIC14.16□□□□□ -0.14
CXCL13O43927 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.16□□□□□ -0.14
CXCL13O43927 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.16□□□□□ -0.14
CXCL13O43927 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.16□□□□□ -0.14
CXCL13O43927 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 AC007541.1-201ENST00000570282 1469 ntBASIC14.16□□□□□ -0.14
CXCL13O43927 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CXCL13O43927 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CXCL13O43927 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CXCL13O43927 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.16□□□□□ -0.14
CXCL13O43927 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.16□□□□□ -0.14
CXCL13O43927 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.16□□□□□ -0.14
CXCL13O43927 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL13O43927 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CXCL13O43927 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms