Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC28A2O43868 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 AC105917.1-201ENST00000506637 2539 ntBASIC15.34■□□□□ 0.05
SLC28A2O43868 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SLC28A2O43868 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC28A2O43868 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC28A2O43868 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SLC28A2O43868 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC28A2O43868 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.33■□□□□ 0.05
SLC28A2O43868 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC28A2O43868 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SLC28A2O43868 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC28A2O43868 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC28A2O43868 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SLC28A2O43868 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC28A2O43868 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC28A2O43868 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC28A2O43868 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.33■□□□□ 0.04
SLC28A2O43868 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
SLC28A2O43868 AC104794.3-201ENST00000566840 1248 ntBASIC15.33■□□□□ 0.04
SLC28A2O43868 AP000842.3-202ENST00000569238 1080 ntBASIC15.33■□□□□ 0.04
SLC28A2O43868 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.33■□□□□ 0.04
SLC28A2O43868 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC28A2O43868 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.33■□□□□ 0.04
SLC28A2O43868 TMEM261P1-201ENST00000604899 340 ntBASIC15.33■□□□□ 0.04
SLC28A2O43868 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC28A2O43868 AC003101.2-201ENST00000612557 442 ntBASIC15.33■□□□□ 0.04
SLC28A2O43868 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 AL138828.2-201ENST00000615812 383 ntBASIC15.33■□□□□ 0.04
SLC28A2O43868 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SLC28A2O43868 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC28A2O43868 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SLC28A2O43868 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC28A2O43868 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC28A2O43868 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SLC28A2O43868 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
SLC28A2O43868 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC28A2O43868 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC28A2O43868 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC28A2O43868 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SLC28A2O43868 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC28A2O43868 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC28A2O43868 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC28A2O43868 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SLC28A2O43868 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC28A2O43868 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SLC28A2O43868 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SLC28A2O43868 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC28A2O43868 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC28A2O43868 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SLC28A2O43868 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC28A2O43868 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC28A2O43868 AC008267.7-201ENST00000624570 1194 ntBASIC15.32■□□□□ 0.04
SLC28A2O43868 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC28A2O43868 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC28A2O43868 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
SLC28A2O43868 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC28A2O43868 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC28A2O43868 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC28A2O43868 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC28A2O43868 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC28A2O43868 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC28A2O43868 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC28A2O43868 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC28A2O43868 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC28A2O43868 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC28A2O43868 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC28A2O43868 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms