Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.81■□□□□ 0.12
PHGDHO43175 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.81■□□□□ 0.12
PHGDHO43175 TIMM8BP1-201ENST00000452384 211 ntBASIC15.81■□□□□ 0.12
PHGDHO43175 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.81■□□□□ 0.12
PHGDHO43175 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
PHGDHO43175 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 LINC01225-203ENST00000563550 1244 ntBASIC15.81■□□□□ 0.12
PHGDHO43175 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.81■□□□□ 0.12
PHGDHO43175 AC026120.1-201ENST00000611536 926 ntBASIC15.81■□□□□ 0.12
PHGDHO43175 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.81■□□□□ 0.12
PHGDHO43175 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.81■□□□□ 0.12
PHGDHO43175 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
PHGDHO43175 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PHGDHO43175 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.8■□□□□ 0.12
PHGDHO43175 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.8■□□□□ 0.12
PHGDHO43175 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PHGDHO43175 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 AC099063.4-201ENST00000641099 1602 ntBASIC15.8■□□□□ 0.12
PHGDHO43175 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.8■□□□□ 0.12
PHGDHO43175 CYP4F24P-201ENST00000586049 1580 ntBASIC15.8■□□□□ 0.12
PHGDHO43175 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.8■□□□□ 0.12
PHGDHO43175 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 MIR346-201ENST00000362234 95 ntBASIC15.8■□□□□ 0.12
PHGDHO43175 HLA-H-201ENST00000383620 1096 ntBASIC15.8■□□□□ 0.12
PHGDHO43175 YBX2P1-201ENST00000394192 760 ntBASIC15.8■□□□□ 0.12
PHGDHO43175 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 AC026396.1-201ENST00000419388 421 ntBASIC15.8■□□□□ 0.12
PHGDHO43175 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.8■□□□□ 0.12
PHGDHO43175 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.8■□□□□ 0.12
PHGDHO43175 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.8■□□□□ 0.12
PHGDHO43175 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 IGHV3-62-201ENST00000520057 340 ntBASIC15.8■□□□□ 0.12
PHGDHO43175 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.8■□□□□ 0.12
PHGDHO43175 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.8■□□□□ 0.12
PHGDHO43175 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.8■□□□□ 0.12
PHGDHO43175 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.8■□□□□ 0.12
PHGDHO43175 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 AC127383.1-201ENST00000444697 1800 ntBASIC15.8■□□□□ 0.12
PHGDHO43175 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHGDHO43175 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
PHGDHO43175 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PHGDHO43175 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PHGDHO43175 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.8■□□□□ 0.12
PHGDHO43175 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.79■□□□□ 0.12
PHGDHO43175 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.79■□□□□ 0.12
PHGDHO43175 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
PHGDHO43175 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.79■□□□□ 0.12
PHGDHO43175 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PHGDHO43175 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.79■□□□□ 0.12
PHGDHO43175 MCCD1P2-201ENST00000423228 335 ntBASIC15.79■□□□□ 0.12
PHGDHO43175 POLD2P1-201ENST00000511220 997 ntBASIC15.79■□□□□ 0.12
PHGDHO43175 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.79■□□□□ 0.12
PHGDHO43175 AC040169.1-201ENST00000565382 521 ntBASIC15.79■□□□□ 0.12
PHGDHO43175 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.79■□□□□ 0.12
PHGDHO43175 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PHGDHO43175 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms