Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.19■□□□□ 0.02
PDLIM1O00151 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.19■□□□□ 0.02
PDLIM1O00151 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.19■□□□□ 0.02
PDLIM1O00151 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM1O00151 AL590627.1-203ENST00000421194 1026 ntBASIC15.19■□□□□ 0.02
PDLIM1O00151 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.19■□□□□ 0.02
PDLIM1O00151 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM1O00151 AC136632.2-201ENST00000512891 861 ntBASIC15.19■□□□□ 0.02
PDLIM1O00151 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.19■□□□□ 0.02
PDLIM1O00151 AL356488.2-201ENST00000602755 427 ntBASIC15.19■□□□□ 0.02
PDLIM1O00151 REXO1L3P-201ENST00000622202 1288 ntBASIC15.19■□□□□ 0.02
PDLIM1O00151 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM1O00151 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM1O00151 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PDLIM1O00151 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM1O00151 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM1O00151 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.19■□□□□ 0.02
PDLIM1O00151 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM1O00151 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM1O00151 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PDLIM1O00151 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
PDLIM1O00151 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PDLIM1O00151 AC118758.2-201ENST00000614242 2813 ntBASIC15.18■□□□□ 0.02
PDLIM1O00151 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PDLIM1O00151 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PDLIM1O00151 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 CES1P1-201ENST00000421606 1704 ntBASIC15.18■□□□□ 0.02
PDLIM1O00151 AC090616.6-203ENST00000579186 1945 ntBASIC15.18■□□□□ 0.02
PDLIM1O00151 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM1O00151 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.18■□□□□ 0.02
PDLIM1O00151 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM1O00151 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.18■□□□□ 0.02
PDLIM1O00151 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM1O00151 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.18■□□□□ 0.02
PDLIM1O00151 AC098831.1-202ENST00000438821 336 ntBASIC15.18■□□□□ 0.02
PDLIM1O00151 AC092910.1-201ENST00000482027 1129 ntBASIC15.18■□□□□ 0.02
PDLIM1O00151 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.18■□□□□ 0.02
PDLIM1O00151 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.18■□□□□ 0.02
PDLIM1O00151 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM1O00151 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.18■□□□□ 0.02
PDLIM1O00151 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.18■□□□□ 0.02
PDLIM1O00151 AC117500.6-201ENST00000624871 588 ntBASIC15.18■□□□□ 0.02
PDLIM1O00151 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.18■□□□□ 0.02
PDLIM1O00151 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.18■□□□□ 0.02
PDLIM1O00151 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.18■□□□□ 0.02
PDLIM1O00151 AL805961.1-202ENST00000641562 540 ntBASIC15.18■□□□□ 0.02
PDLIM1O00151 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM1O00151 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM1O00151 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PDLIM1O00151 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PDLIM1O00151 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM1O00151 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM1O00151 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PDLIM1O00151 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PDLIM1O00151 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.17■□□□□ 0.02
PDLIM1O00151 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.17■□□□□ 0.02
PDLIM1O00151 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.17■□□□□ 0.02
PDLIM1O00151 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
PDLIM1O00151 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PDLIM1O00151 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.17■□□□□ 0.02
PDLIM1O00151 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 PAWRP1-201ENST00000451083 565 ntBASIC15.17■□□□□ 0.02
PDLIM1O00151 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.17■□□□□ 0.02
PDLIM1O00151 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.17■□□□□ 0.02
PDLIM1O00151 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.17■□□□□ 0.02
PDLIM1O00151 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.17■□□□□ 0.02
PDLIM1O00151 AC145285.3-201ENST00000564603 959 ntBASIC15.17■□□□□ 0.02
PDLIM1O00151 AC091167.2-201ENST00000579581 588 ntBASIC15.17■□□□□ 0.02
PDLIM1O00151 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.17■□□□□ 0.02
PDLIM1O00151 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
PDLIM1O00151 AC020765.3-201ENST00000613051 740 ntBASIC15.17■□□□□ 0.02
PDLIM1O00151 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.17■□□□□ 0.02
PDLIM1O00151 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.17■□□□□ 0.02
PDLIM1O00151 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms