Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 MYO7B-203ENST00000428314 6715 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 AC005104.2-201ENST00000427818 678 ntBASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 KRT18P23-201ENST00000435622 1283 ntBASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 MIR3180-5-201ENST00000583743 153 ntBASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 AL928921.2-201ENST00000641325 2442 ntBASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 STX3-203ENST00000529177 1571 ntTSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 EIF4E3-205ENST00000448225 6209 ntTSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 AC136759.1-202ENST00000530858 2194 ntBASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 TMEM164-201ENST00000288381 5452 ntTSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
CHKB-CPT1BH3BT56 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms