Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L3A6NE82 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 AC079328.2-201ENST00000561241 3354 ntBASIC13.79□□□□□ -0.2
MBD3L3A6NE82 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 MSTO2P-201ENST00000314835 1709 ntBASIC13.79□□□□□ -0.2
MBD3L3A6NE82 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.79□□□□□ -0.2
MBD3L3A6NE82 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 RPL7P3-201ENST00000441388 714 ntBASIC13.79□□□□□ -0.2
MBD3L3A6NE82 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 AP000812.2-201ENST00000538934 718 ntBASIC13.79□□□□□ -0.2
MBD3L3A6NE82 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 CROCCP1-201ENST00000426910 5675 ntBASIC13.79□□□□□ -0.2
MBD3L3A6NE82 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MBD3L3A6NE82 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 AL603832.2-201ENST00000566195 2125 ntBASIC13.78□□□□□ -0.2
MBD3L3A6NE82 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 FO681548.1-201ENST00000455617 1132 ntBASIC13.78□□□□□ -0.2
MBD3L3A6NE82 AC007551.1-201ENST00000457394 519 ntBASIC13.78□□□□□ -0.2
MBD3L3A6NE82 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 AC106760.1-201ENST00000508690 800 ntBASIC13.78□□□□□ -0.2
MBD3L3A6NE82 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 AP001582.1-201ENST00000525856 295 ntBASIC13.78□□□□□ -0.2
MBD3L3A6NE82 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 AP005019.2-201ENST00000615104 511 ntBASIC13.78□□□□□ -0.2
MBD3L3A6NE82 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 AL138799.1-201ENST00000448213 1675 ntBASIC13.78□□□□□ -0.2
MBD3L3A6NE82 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MBD3L3A6NE82 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
MBD3L3A6NE82 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.77□□□□□ -0.2
MBD3L3A6NE82 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.77□□□□□ -0.2
MBD3L3A6NE82 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
MBD3L3A6NE82 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms