Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.82□□□□□ -0.2
SHISA3A0PJX4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 AF238378.1-201ENST00000526806 358 ntBASIC13.82□□□□□ -0.2
SHISA3A0PJX4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 OR7E14P-202ENST00000530490 1290 ntBASIC13.82□□□□□ -0.2
SHISA3A0PJX4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 AL356488.2-201ENST00000602755 427 ntBASIC13.82□□□□□ -0.2
SHISA3A0PJX4 AL009183.1-201ENST00000603760 355 ntBASIC13.82□□□□□ -0.2
SHISA3A0PJX4 AC093458.2-201ENST00000623150 629 ntBASIC13.82□□□□□ -0.2
SHISA3A0PJX4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 MTHFR-210ENST00000641407 2387 ntBASIC13.82□□□□□ -0.2
SHISA3A0PJX4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 AC136759.1-202ENST00000530858 2194 ntBASIC13.82□□□□□ -0.2
SHISA3A0PJX4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 HSPA7-201ENST00000445535 1927 ntBASIC13.82□□□□□ -0.2
SHISA3A0PJX4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHISA3A0PJX4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 AP002414.3-201ENST00000589352 1468 ntBASIC13.81□□□□□ -0.2
SHISA3A0PJX4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 AL513480.1-201ENST00000451731 511 ntBASIC13.81□□□□□ -0.2
SHISA3A0PJX4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHISA3A0PJX4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms