Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 TPM4P1-201ENST00000436100 807 ntBASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AC009078.2-202ENST00000463353 338 ntBASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 RNA5SP410-201ENST00000516285 106 ntBASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AC099522.2-201ENST00000607001 744 ntBASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 LINC02228-204ENST00000642115 2962 ntBASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 C18orf15-201ENST00000623680 2534 ntBASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00959A0A1B0GUT2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 AC112693.3-201ENST00000624819 1983 ntBASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.83□□□□□ -0.68
LINC00959A0A1B0GUT2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms