Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 SBF1P1-201ENST00000444527 5631 ntBASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 AC092474.2-201ENST00000424288 719 ntBASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 PRSS29P-201ENST00000440800 595 ntBASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 AC092910.1-201ENST00000482027 1129 ntBASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 AC108751.1-201ENST00000490852 363 ntBASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 AC002347.1-201ENST00000569543 541 ntBASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 AC148477.8-201ENST00000624298 468 ntBASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 AC139749.1-202ENST00000617529 3139 ntBASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 LINC00528-201ENST00000600723 2160 ntBASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 AC018712.1-201ENST00000455767 687 ntBASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 UNC93B7-201ENST00000509439 705 ntBASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms