Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 SAPCD2P3-201ENST00000455031 850 ntBASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 SCARNA2-201ENST00000458748 420 ntBASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 AP001005.1-201ENST00000571755 1248 ntBASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 AC006557.2-201ENST00000592985 1240 ntBASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 AC021097.1-201ENST00000607902 574 ntBASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.6□□□□□ -0.07
PCDHGB1Q9Y5G3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 AL161772.1-201ENST00000610494 4412 ntBASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 AKR1C7P-201ENST00000305623 895 ntBASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 MIR1233-2-201ENST00000408138 82 ntBASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 MIR1233-1-201ENST00000408722 82 ntBASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGB1Q9Y5G3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHGB1Q9Y5G3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.58□□□□□ -0.07
PCDHGB1Q9Y5G3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHGB1Q9Y5G3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
PCDHGB1Q9Y5G3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
PCDHGB1Q9Y5G3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHGB1Q9Y5G3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHGB1Q9Y5G3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHGB1Q9Y5G3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.58□□□□□ -0.07
PCDHGB1Q9Y5G3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.58□□□□□ -0.07
PCDHGB1Q9Y5G3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
PCDHGB1Q9Y5G3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHGB1Q9Y5G3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHGB1Q9Y5G3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGB1Q9Y5G3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHGB1Q9Y5G3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHGB1Q9Y5G3 AC012569.1-201ENST00000591191 1524 ntBASIC14.58□□□□□ -0.08
PCDHGB1Q9Y5G3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGB1Q9Y5G3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGB1Q9Y5G3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGB1Q9Y5G3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDHGB1Q9Y5G3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms