Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 DUX4L26-201ENST00000489078 1255 ntBASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 AP000867.3-201ENST00000524675 377 ntBASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.04□□□□□ -0.32
RCL1Q9Y2P8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 AC148477.4-201ENST00000613430 1793 ntBASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 AC012615.1-201ENST00000565797 1299 ntBASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 AC012569.1-201ENST00000591191 1524 ntBASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 AC006504.4-201ENST00000592118 1568 ntBASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RCL1Q9Y2P8 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
RCL1Q9Y2P8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms