Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 Z97205.2-201ENST00000564697 1639 ntBASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 AC103702.1-201ENST00000548801 2630 ntBASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 HLA-V-201ENST00000429037 534 ntBASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 HIST3H2BA-201ENST00000436555 524 ntBASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 AL589987.1-201ENST00000453380 819 ntBASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 AC243562.2-201ENST00000561247 970 ntBASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 CTBP2P3-201ENST00000585629 1255 ntBASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 AL136982.4-201ENST00000437689 1740 ntBASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSX2IPQ9Y2D8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSX2IPQ9Y2D8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms