Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 AC018892.3-201ENST00000623986 2499 ntBASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 CSF2RBP1-201ENST00000447905 391 ntBASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 ZNF767P-206ENST00000513792 565 ntBASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 AC010319.3-201ENST00000597028 470 ntBASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 CYP4F24P-201ENST00000586049 1580 ntBASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HPS5Q9UPZ3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 FAM21FP-201ENST00000426241 1131 ntBASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 AC007551.1-201ENST00000457394 519 ntBASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 AC233724.13-201ENST00000598383 410 ntBASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 AC105917.1-201ENST00000506637 2539 ntBASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.79■□□□□ 0.6
HPS5Q9UPZ3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms