Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL033527.5-202ENST00000641632 1098 ntBASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA1Q9UND3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 CU639417.3-201ENST00000624240 1404 ntBASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 AL592424.1-201ENST00000563624 1536 ntBASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 KRT8P12-202ENST00000472924 1397 ntBASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA1Q9UND3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 AC138969.3-201ENST00000546612 1459 ntBASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 AC138932.2-201ENST00000548268 1459 ntBASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 AC126755.4-201ENST00000549796 1459 ntBASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 AC087499.6-201ENST00000411576 835 ntBASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 DFFBP1-201ENST00000433250 979 ntBASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 AL139010.1-201ENST00000454878 894 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms