Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 AC092364.2-201ENST00000596710 2692 ntBASIC14.55□□□□□ -0.08
LRFN1Q9P244 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 MIR648-201ENST00000385046 94 ntBASIC14.55□□□□□ -0.08
LRFN1Q9P244 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 AL512384.1-201ENST00000406683 331 ntBASIC14.55□□□□□ -0.08
LRFN1Q9P244 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 ELK1P1-201ENST00000485699 580 ntBASIC14.55□□□□□ -0.08
LRFN1Q9P244 GIMAP3P-201ENST00000495150 836 ntBASIC14.55□□□□□ -0.08
LRFN1Q9P244 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 CTBP2P3-201ENST00000585629 1255 ntBASIC14.55□□□□□ -0.08
LRFN1Q9P244 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 CLK3P2-201ENST00000427566 1453 ntBASIC14.55□□□□□ -0.08
LRFN1Q9P244 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRFN1Q9P244 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.55□□□□□ -0.08
LRFN1Q9P244 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 RPL13P2-201ENST00000440687 659 ntBASIC14.54□□□□□ -0.08
LRFN1Q9P244 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 AC036164.1-201ENST00000570544 333 ntBASIC14.54□□□□□ -0.08
LRFN1Q9P244 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
LRFN1Q9P244 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRFN1Q9P244 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms