Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTN3Q9P232 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.97■□□□□ 0.31
CNTN3Q9P232 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.97■□□□□ 0.31
CNTN3Q9P232 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.97■□□□□ 0.31
CNTN3Q9P232 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNTN3Q9P232 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
CNTN3Q9P232 IGHV3-72-202ENST00000621503 303 ntBASIC16.97■□□□□ 0.31
CNTN3Q9P232 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTN3Q9P232 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNTN3Q9P232 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNTN3Q9P232 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTN3Q9P232 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTN3Q9P232 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CNTN3Q9P232 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CNTN3Q9P232 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CNTN3Q9P232 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNTN3Q9P232 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.97■□□□□ 0.31
CNTN3Q9P232 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.97■□□□□ 0.31
CNTN3Q9P232 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTN3Q9P232 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTN3Q9P232 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNTN3Q9P232 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 AL133267.1-201ENST00000398220 340 ntBASIC16.96■□□□□ 0.31
CNTN3Q9P232 AL512384.1-201ENST00000406683 331 ntBASIC16.96■□□□□ 0.31
CNTN3Q9P232 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTN3Q9P232 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CNTN3Q9P232 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CNTN3Q9P232 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.96■□□□□ 0.3
CNTN3Q9P232 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNTN3Q9P232 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CNTN3Q9P232 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNTN3Q9P232 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.96■□□□□ 0.3
CNTN3Q9P232 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNTN3Q9P232 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTN3Q9P232 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTN3Q9P232 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTN3Q9P232 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTN3Q9P232 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTN3Q9P232 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTN3Q9P232 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTN3Q9P232 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CNTN3Q9P232 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTN3Q9P232 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.95■□□□□ 0.3
CNTN3Q9P232 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNTN3Q9P232 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTN3Q9P232 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.95■□□□□ 0.3
CNTN3Q9P232 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTN3Q9P232 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTN3Q9P232 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTN3Q9P232 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNTN3Q9P232 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CNTN3Q9P232 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTN3Q9P232 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms