Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 AC067750.1-201ENST00000608826 6545 ntBASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 CICP13-201ENST00000422015 2789 ntBASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 TNRC18P2-201ENST00000417666 2714 ntBASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 UPF3AP3-201ENST00000420996 769 ntBASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 AC005829.1-201ENST00000570002 483 ntBASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LIN7CQ9NUP9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 AC092474.2-201ENST00000424288 719 ntBASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 GPX1P2-201ENST00000429271 606 ntBASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 FAM86C2P-203ENST00000528684 1004 ntBASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 AC023511.2-201ENST00000618803 211 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms