Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 AC092337.1-201ENST00000568699 1129 ntBASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ECHDC1Q9NTX5 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.24■□□□□ 0.67
ECHDC1Q9NTX5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 TOMM22P5-201ENST00000416399 439 ntBASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 AJ011932.1-201ENST00000621707 465 ntBASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ECHDC1Q9NTX5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 BCRP1-201ENST00000444246 691 ntBASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 SPCS2P1-201ENST00000561636 679 ntBASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 SRD5A3P1-201ENST00000603021 949 ntBASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 AL096865.1-201ENST00000606796 927 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms