Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.58■□□□□ 0.41
VTA1Q9NP79 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.58■□□□□ 0.41
VTA1Q9NP79 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
VTA1Q9NP79 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VTA1Q9NP79 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VTA1Q9NP79 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
VTA1Q9NP79 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.58■□□□□ 0.41
VTA1Q9NP79 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTA1Q9NP79 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTA1Q9NP79 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTA1Q9NP79 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VTA1Q9NP79 KRT18P25-201ENST00000508931 1278 ntBASIC17.58■□□□□ 0.4
VTA1Q9NP79 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 DUX4L45-201ENST00000566406 1057 ntBASIC17.58■□□□□ 0.4
VTA1Q9NP79 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTA1Q9NP79 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTA1Q9NP79 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VTA1Q9NP79 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTA1Q9NP79 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTA1Q9NP79 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
VTA1Q9NP79 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 AL596087.1-201ENST00000400979 1969 ntBASIC17.57■□□□□ 0.4
VTA1Q9NP79 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 AL138799.1-201ENST00000448213 1675 ntBASIC17.57■□□□□ 0.4
VTA1Q9NP79 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTA1Q9NP79 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.57■□□□□ 0.4
VTA1Q9NP79 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTA1Q9NP79 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTA1Q9NP79 TNRC18P3-201ENST00000441896 2691 ntBASIC17.56■□□□□ 0.4
VTA1Q9NP79 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTA1Q9NP79 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTA1Q9NP79 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTA1Q9NP79 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTA1Q9NP79 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTA1Q9NP79 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTA1Q9NP79 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTA1Q9NP79 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 MIR6787-201ENST00000616675 61 ntBASIC17.56■□□□□ 0.4
VTA1Q9NP79 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VTA1Q9NP79 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTA1Q9NP79 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.56■□□□□ 0.4
VTA1Q9NP79 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms