Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF2Q9HAU5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 CICP23-201ENST00000605013 2741 ntBASIC19.53■□□□□ 0.72
UPF2Q9HAU5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 AC109635.5-201ENST00000533593 962 ntBASIC19.53■□□□□ 0.72
UPF2Q9HAU5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 CLEC4GP1-201ENST00000596555 870 ntBASIC19.53■□□□□ 0.72
UPF2Q9HAU5 AL078644.1-201ENST00000609881 752 ntBASIC19.53■□□□□ 0.72
UPF2Q9HAU5 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.53■□□□□ 0.72
UPF2Q9HAU5 ST20-AS1-201ENST00000560255 4223 ntBASIC19.52■□□□□ 0.72
UPF2Q9HAU5 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 PMS2P7-201ENST00000506558 1336 ntBASIC19.52■□□□□ 0.72
UPF2Q9HAU5 AC073439.1-201ENST00000624121 1774 ntBASIC19.52■□□□□ 0.72
UPF2Q9HAU5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 PRSS29P-201ENST00000440800 595 ntBASIC19.52■□□□□ 0.72
UPF2Q9HAU5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF2Q9HAU5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
UPF2Q9HAU5 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UPF2Q9HAU5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC19.52■□□□□ 0.71
UPF2Q9HAU5 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UPF2Q9HAU5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UPF2Q9HAU5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
UPF2Q9HAU5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms