Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EFCC1Q9HA90 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
EFCC1Q9HA90 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
EFCC1Q9HA90 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
EFCC1Q9HA90 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.46■□□□□ 0.55
EFCC1Q9HA90 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
EFCC1Q9HA90 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
EFCC1Q9HA90 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFCC1Q9HA90 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
EFCC1Q9HA90 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFCC1Q9HA90 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
EFCC1Q9HA90 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
EFCC1Q9HA90 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
EFCC1Q9HA90 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.45■□□□□ 0.54
EFCC1Q9HA90 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 FO393414.2-201ENST00000405153 598 ntBASIC18.45■□□□□ 0.54
EFCC1Q9HA90 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 RN7SL560P-201ENST00000577943 264 ntBASIC18.45■□□□□ 0.54
EFCC1Q9HA90 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 MIR4321-201ENST00000592276 80 ntBASIC18.45■□□□□ 0.54
EFCC1Q9HA90 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 AL118558.3-201ENST00000607414 1079 ntBASIC18.45■□□□□ 0.54
EFCC1Q9HA90 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 AC009542.2-202ENST00000619004 1067 ntBASIC18.45■□□□□ 0.54
EFCC1Q9HA90 MIR6727-201ENST00000620702 65 ntBASIC18.45■□□□□ 0.54
EFCC1Q9HA90 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 AC099063.4-201ENST00000641099 1602 ntBASIC18.45■□□□□ 0.54
EFCC1Q9HA90 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EFCC1Q9HA90 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 AL355864.2-201ENST00000447420 863 ntBASIC18.44■□□□□ 0.54
EFCC1Q9HA90 IGHJ2P-201ENST00000454480 60 ntBASIC18.44■□□□□ 0.54
EFCC1Q9HA90 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 AP001889.1-201ENST00000525414 633 ntBASIC18.44■□□□□ 0.54
EFCC1Q9HA90 AC068587.3-201ENST00000526613 355 ntBASIC18.44■□□□□ 0.54
EFCC1Q9HA90 AC079316.1-201ENST00000548397 411 ntBASIC18.44■□□□□ 0.54
EFCC1Q9HA90 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 AL365330.1-201ENST00000607459 531 ntBASIC18.44■□□□□ 0.54
EFCC1Q9HA90 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EFCC1Q9HA90 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
EFCC1Q9HA90 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.43■□□□□ 0.54
EFCC1Q9HA90 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EFCC1Q9HA90 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EFCC1Q9HA90 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.43■□□□□ 0.54
EFCC1Q9HA90 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
EFCC1Q9HA90 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EFCC1Q9HA90 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms