Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC46A2Q9BY10 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A2Q9BY10 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A2Q9BY10 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A2Q9BY10 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A2Q9BY10 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A2Q9BY10 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A2Q9BY10 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC46A2Q9BY10 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.21■□□□□ 0.18
SLC46A2Q9BY10 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC46A2Q9BY10 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC46A2Q9BY10 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SLC46A2Q9BY10 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.21■□□□□ 0.18
SLC46A2Q9BY10 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
SLC46A2Q9BY10 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 RNA5SP412-201ENST00000516234 123 ntBASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 GNRHR2-203ENST00000581100 1187 ntBASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 MIR4538-201ENST00000581377 78 ntBASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A2Q9BY10 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 LINC02447-202ENST00000501888 2146 ntBASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A2Q9BY10 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms