Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 AL390955.2-201ENST00000603032 514 ntBASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 AL096865.1-201ENST00000606796 927 ntBASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 AC005622.1-201ENST00000636801 1703 ntBASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 BCRP1-201ENST00000444246 691 ntBASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 AL158211.3-201ENST00000607385 239 ntBASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 AC007967.4-201ENST00000614700 386 ntBASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 AL589702.1-201ENST00000641229 1509 ntBASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.38□□□□□ -0.27
PCGF1Q9BSM1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCGF1Q9BSM1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms