Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARID3AQ99856 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ARID3AQ99856 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.18■□□□□ 0.5
ARID3AQ99856 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
ARID3AQ99856 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.18■□□□□ 0.5
ARID3AQ99856 AC022532.1-201ENST00000624563 1728 ntBASIC18.18■□□□□ 0.5
ARID3AQ99856 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ARID3AQ99856 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ARID3AQ99856 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC18.18■□□□□ 0.5
ARID3AQ99856 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ARID3AQ99856 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.18■□□□□ 0.5
ARID3AQ99856 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ARID3AQ99856 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
ARID3AQ99856 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.18■□□□□ 0.5
ARID3AQ99856 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.18■□□□□ 0.5
ARID3AQ99856 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.18■□□□□ 0.5
ARID3AQ99856 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 PGM5P2-202ENST00000637225 1043 ntBASIC18.18■□□□□ 0.5
ARID3AQ99856 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ARID3AQ99856 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.18■□□□□ 0.5
ARID3AQ99856 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC18.18■□□□□ 0.5
ARID3AQ99856 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.18■□□□□ 0.5
ARID3AQ99856 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC18.18■□□□□ 0.5
ARID3AQ99856 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARID3AQ99856 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ARID3AQ99856 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC18.17■□□□□ 0.5
ARID3AQ99856 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 KRT8P49-201ENST00000604166 1432 ntBASIC18.17■□□□□ 0.5
ARID3AQ99856 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ARID3AQ99856 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ARID3AQ99856 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.17■□□□□ 0.5
ARID3AQ99856 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.17■□□□□ 0.5
ARID3AQ99856 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 SLC25A1P1-201ENST00000528351 927 ntBASIC18.17■□□□□ 0.5
ARID3AQ99856 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.17■□□□□ 0.5
ARID3AQ99856 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
ARID3AQ99856 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.17■□□□□ 0.5
ARID3AQ99856 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ARID3AQ99856 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.17■□□□□ 0.5
ARID3AQ99856 TUBB8P12-201ENST00000308911 1335 ntBASIC18.17■□□□□ 0.5
ARID3AQ99856 IL9RP2-201ENST00000423948 1312 ntBASIC18.17■□□□□ 0.5
ARID3AQ99856 TUBB7P-202ENST00000428444 1305 ntBASIC18.17■□□□□ 0.5
ARID3AQ99856 TUBB8P7-204ENST00000567960 1332 ntBASIC18.17■□□□□ 0.5
ARID3AQ99856 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.17■□□□□ 0.5
ARID3AQ99856 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARID3AQ99856 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.17■□□□□ 0.5
ARID3AQ99856 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.17■□□□□ 0.5
ARID3AQ99856 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ARID3AQ99856 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
ARID3AQ99856 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARID3AQ99856 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ARID3AQ99856 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARID3AQ99856 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARID3AQ99856 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms