Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 AL391280.1-201ENST00000506969 1062 ntBASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP2Q96SN8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 AL138799.1-201ENST00000448213 1675 ntBASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 AC090616.6-203ENST00000579186 1945 ntBASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 KRT8P35-201ENST00000483942 1338 ntBASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 DOC2GP-204ENST00000639052 2548 ntBASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 RPL5P21-201ENST00000404620 815 ntBASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 AC005695.3-201ENST00000614522 232 ntBASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 BX539320.1-201ENST00000623759 877 ntBASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.29■□□□□ 0.52
CDK5RAP2Q96SN8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.28■□□□□ 0.52
CDK5RAP2Q96SN8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDK5RAP2Q96SN8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms