Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 AC124067.4-201ENST00000519691 2379 ntBASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC46A1Q96NT5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 EEF1DP4-201ENST00000446006 880 ntBASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 AP000812.2-201ENST00000538934 718 ntBASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC46A1Q96NT5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 AL596087.1-201ENST00000400979 1969 ntBASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC46A1Q96NT5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms